Mercurial > repos > tduigou > rrparser

annotate output.json @ 9:c320aba02826 draft

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planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
author tduigou
date Wed, 02 Apr 2025 13:24:04 +0000
parents 2ec2fae2a58d
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
8
2ec2fae2a58d planemo upload for repository https://github.com/brsynth/rrparser commit d70e0f16e6cf8c5a62ba6cd8e4873ee44a717d74-dirty
tduigou
parents:
diff changeset
1 {
2ec2fae2a58d planemo upload for repository https://github.com/brsynth/rrparser commit d70e0f16e6cf8c5a62ba6cd8e4873ee44a717d74-dirty
tduigou
parents:
diff changeset
2 "summary": {
2ec2fae2a58d planemo upload for repository https://github.com/brsynth/rrparser commit d70e0f16e6cf8c5a62ba6cd8e4873ee44a717d74-dirty
tduigou
parents:
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3 "num_errors": 0,
2ec2fae2a58d planemo upload for repository https://github.com/brsynth/rrparser commit d70e0f16e6cf8c5a62ba6cd8e4873ee44a717d74-dirty
tduigou
parents:
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4 "num_failures": 0,
2ec2fae2a58d planemo upload for repository https://github.com/brsynth/rrparser commit d70e0f16e6cf8c5a62ba6cd8e4873ee44a717d74-dirty
tduigou
parents:
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5 "num_skips": 0,
9
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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6 "num_tests": 6
8
2ec2fae2a58d planemo upload for repository https://github.com/brsynth/rrparser commit d70e0f16e6cf8c5a62ba6cd8e4873ee44a717d74-dirty
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7 },
9
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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8 "tests": [
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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9 {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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10 "data": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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11 "inputs": {},
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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12 "job": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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13 "command_line": "python -m rrparser --rules_file retrorules --rule-type 'retro' --diameters '2,4,6,8,10,12,14,16' --output-format csv --rules-dir \"${TMPDIR:-.}\" --outfile '/tmp/tmpm3epclar/job_working_directory/000/1/outputs/dataset_8cf4442b-9d56-419c-b3e3-bd389549674c.dat'",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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14 "command_version": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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15 "copied_from_job_id": null,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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16 "create_time": "2025-04-02T13:18:29.029554",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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17 "dependencies": [],
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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18 "exit_code": 0,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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19 "external_id": "176158",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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20 "galaxy_version": "24.2",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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21 "handler": null,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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22 "history_id": "9e4e5a4b3a855398",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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23 "id": "9e4e5a4b3a855398",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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24 "inputs": {},
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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25 "job_messages": [],
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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26 "job_metrics": [],
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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27 "job_runner_name": null,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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28 "job_stderr": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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29 "job_stdout": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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30 "model_class": "Job",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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31 "output_collections": {},
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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32 "outputs": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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33 "out_rules": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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34 "id": "9e4e5a4b3a855398",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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35 "src": "hda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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36 "uuid": "8cf4442b-9d56-419c-b3e3-bd389549674c"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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37 }
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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38 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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39 "params": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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40 "__input_ext": "\"input\"",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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41 "adv": "{\"compress\": false, \"diameters\": [\"2\", \"4\", \"6\", \"8\", \"10\", \"12\", \"14\", \"16\"], \"input_conditional_ec\": {\"__current_case__\": 0, \"input_type\": \"no\"}, \"input_scores_file\": null}",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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42 "chromInfo": "\"/tmp/tmpm3epclar/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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43 "dbkey": "\"?\"",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
44 "rules": "{\"__current_case__\": 0, \"type\": \"retro\"}"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
45 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
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46 "state": "ok",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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47 "stderr": "\u001b[32m\nrrparser 2.6.0\n\u001b[0m\n\u001b[32mDownloading retrorules file...\u001b[0m\n\u001b[32mFiltering rules:\u001b[0m\n\u001b[32m -> EC numbers (not in): []\u001b[0m\n\u001b[32m -> Diameters: [2, 4, 6, 8, 10, 12, 14, 16]\u001b[0m\n\u001b[32m -> Rule types: retro\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32m=> 234384 rules found\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32mWriting results...\u001b[0m\n",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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48 "stdout": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
49 "tool_id": "rrparser",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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50 "tool_stderr": "\u001b[32m\nrrparser 2.6.0\n\u001b[0m\n\u001b[32mDownloading retrorules file...\u001b[0m\n\u001b[32mFiltering rules:\u001b[0m\n\u001b[32m -> EC numbers (not in): []\u001b[0m\n\u001b[32m -> Diameters: [2, 4, 6, 8, 10, 12, 14, 16]\u001b[0m\n\u001b[32m -> Rule types: retro\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32m=> 234384 rules found\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32mWriting results...\u001b[0m\n",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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51 "tool_stdout": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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52 "update_time": "2025-04-02T13:18:52.887632",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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53 "user_email": "planemo@galaxyproject.org",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
54 "user_id": "9e4e5a4b3a855398"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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55 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
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56 "status": "success",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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57 "test_index": 0,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
58 "time_seconds": 25.15486192703247,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
59 "tool_id": "rrparser",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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60 "tool_version": "2.7.0+galaxy2"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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61 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
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62 "has_data": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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63 "id": "rrparser-0"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
64 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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65 {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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66 "data": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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67 "inputs": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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68 "adv|diameters": [
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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69 "2",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
70 "4",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
71 "6"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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72 ]
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
73 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
74 "job": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
75 "command_line": "python -m rrparser --rules_file retrorules --rule-type 'retro' --diameters '2,4,6' --output-format csv --rules-dir \"${TMPDIR:-.}\" --outfile '/tmp/tmpm3epclar/job_working_directory/000/2/outputs/dataset_2f780503-a4a1-4425-abc9-f3221ad92ea6.dat'",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
76 "command_version": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
77 "copied_from_job_id": null,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
78 "create_time": "2025-04-02T13:18:54.274131",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
79 "dependencies": [
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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80 {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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81 "cacheable": false,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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82 "dependency_resolver": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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83 "auto_init": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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84 "auto_install": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
85 "can_uninstall_dependencies": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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86 "ensure_channels": "conda-forge,bioconda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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87 "model_class": "CondaDependencyResolver",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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88 "prefix": "/home/rkhaled/miniconda3",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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89 "read_only": false,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
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90 "resolver_type": "conda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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91 "resolves_simple_dependencies": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
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92 "use_local": false,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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93 "versionless": false
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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94 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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95 "dependency_type": "conda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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96 "environment_path": "/home/rkhaled/miniconda3/envs/__rrparser@2.7.0",
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97 "exact": true,
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98 "model_class": "MergedCondaDependency",
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99 "name": "rrparser",
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100 "version": "2.7.0"
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101 }
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102 ],
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103 "exit_code": 0,
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104 "external_id": "176359",
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105 "galaxy_version": "24.2",
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106 "handler": null,
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107 "history_id": "1ef788f1e3118195",
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108 "id": "1ef788f1e3118195",
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109 "inputs": {},
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110 "job_messages": [],
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111 "job_metrics": [],
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diff changeset
112 "job_runner_name": null,
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113 "job_stderr": "",
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114 "job_stdout": "",
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115 "model_class": "Job",
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116 "output_collections": {},
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117 "outputs": {
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118 "out_rules": {
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119 "id": "1ef788f1e3118195",
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120 "src": "hda",
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121 "uuid": "2f780503-a4a1-4425-abc9-f3221ad92ea6"
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122 }
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123 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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124 "params": {
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125 "__input_ext": "\"input\"",
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126 "adv": "{\"compress\": false, \"diameters\": [\"2\", \"4\", \"6\"], \"input_conditional_ec\": {\"__current_case__\": 0, \"input_type\": \"no\"}, \"input_scores_file\": null}",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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127 "chromInfo": "\"/tmp/tmpm3epclar/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"",
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diff changeset
128 "dbkey": "\"?\"",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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129 "rules": "{\"__current_case__\": 0, \"type\": \"retro\"}"
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130 },
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131 "state": "ok",
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132 "stderr": "\u001b[32m\nrrparser 2.6.0\n\u001b[0m\n\u001b[32mFiltering rules:\u001b[0m\n\u001b[32m -> EC numbers (not in): []\u001b[0m\n\u001b[32m -> Diameters: [2, 4, 6]\u001b[0m\n\u001b[32m -> Rule types: retro\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32m=> 87894 rules found\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32mWriting results...\u001b[0m\n",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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133 "stdout": "",
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134 "tool_id": "rrparser",
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135 "tool_stderr": "\u001b[32m\nrrparser 2.6.0\n\u001b[0m\n\u001b[32mFiltering rules:\u001b[0m\n\u001b[32m -> EC numbers (not in): []\u001b[0m\n\u001b[32m -> Diameters: [2, 4, 6]\u001b[0m\n\u001b[32m -> Rule types: retro\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32m=> 87894 rules found\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32mWriting results...\u001b[0m\n",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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136 "tool_stdout": "",
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137 "update_time": "2025-04-02T13:19:05.424911",
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diff changeset
138 "user_email": "planemo@galaxyproject.org",
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diff changeset
139 "user_id": "9e4e5a4b3a855398"
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140 },
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141 "status": "success",
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142 "test_index": 1,
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diff changeset
143 "time_seconds": 11.61790680885315,
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diff changeset
144 "tool_id": "rrparser",
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diff changeset
145 "tool_version": "2.7.0+galaxy2"
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diff changeset
146 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
147 "has_data": true,
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diff changeset
148 "id": "rrparser-1"
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149 },
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diff changeset
150 {
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diff changeset
151 "data": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
152 "inputs": {
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153 "rules|file": {
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diff changeset
154 "id": "cb64eeec13fd8bed",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
155 "src": "hda"
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diff changeset
156 },
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diff changeset
157 "rules|type": "rules-file"
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158 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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159 "job": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
160 "command_line": "python -m rrparser --rules_file '/tmp/tmpm3epclar/files/6/f/0/dataset_6f0d32d1-db1c-49fa-91c3-75ccd1396a8a.dat' --input-format 'csv' --diameters '2,4,6,8,10,12,14,16' --output-format csv --rules-dir \"${TMPDIR:-.}\" --outfile '/tmp/tmpm3epclar/job_working_directory/000/4/outputs/dataset_e2d800c7-b383-4f51-8327-1a4cd12ab8f3.dat'",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
161 "command_version": "",
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diff changeset
162 "copied_from_job_id": null,
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diff changeset
163 "create_time": "2025-04-02T13:19:15.849598",
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diff changeset
164 "dependencies": [
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165 {
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diff changeset
166 "cacheable": false,
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diff changeset
167 "dependency_resolver": {
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168 "auto_init": true,
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diff changeset
169 "auto_install": true,
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diff changeset
170 "can_uninstall_dependencies": true,
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diff changeset
171 "ensure_channels": "conda-forge,bioconda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
172 "model_class": "CondaDependencyResolver",
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diff changeset
173 "prefix": "/home/rkhaled/miniconda3",
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diff changeset
174 "read_only": false,
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diff changeset
175 "resolver_type": "conda",
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diff changeset
176 "resolves_simple_dependencies": true,
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diff changeset
177 "use_local": false,
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diff changeset
178 "versionless": false
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diff changeset
179 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
180 "dependency_type": "conda",
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diff changeset
181 "environment_path": "/home/rkhaled/miniconda3/envs/__rrparser@2.7.0",
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diff changeset
182 "exact": true,
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diff changeset
183 "model_class": "MergedCondaDependency",
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diff changeset
184 "name": "rrparser",
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diff changeset
185 "version": "2.7.0"
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186 }
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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187 ],
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
188 "exit_code": 0,
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diff changeset
189 "external_id": "176593",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
190 "galaxy_version": "24.2",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
191 "handler": null,
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diff changeset
192 "history_id": "cb64eeec13fd8bed",
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diff changeset
193 "id": "9df58a1b3ccadf66",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
194 "inputs": {
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195 "rules|file": {
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196 "id": "cb64eeec13fd8bed",
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197 "src": "hda",
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198 "uuid": "6f0d32d1-db1c-49fa-91c3-75ccd1396a8a"
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199 }
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200 },
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201 "job_messages": [],
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202 "job_metrics": [],
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diff changeset
203 "job_runner_name": null,
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204 "job_stderr": "",
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205 "job_stdout": "",
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206 "model_class": "Job",
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207 "output_collections": {},
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208 "outputs": {
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209 "out_rules": {
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210 "id": "9df58a1b3ccadf66",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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211 "src": "hda",
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212 "uuid": "e2d800c7-b383-4f51-8327-1a4cd12ab8f3"
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213 }
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214 },
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215 "params": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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216 "__input_ext": "\"input\"",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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217 "adv": "{\"compress\": false, \"diameters\": [\"2\", \"4\", \"6\", \"8\", \"10\", \"12\", \"14\", \"16\"], \"input_conditional_ec\": {\"__current_case__\": 0, \"input_type\": \"no\"}, \"input_scores_file\": null}",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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218 "chromInfo": "\"/tmp/tmpm3epclar/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"",
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219 "dbkey": "\"?\"",
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220 "rules": "{\"__current_case__\": 3, \"file\": {\"values\": [{\"id\": 3, \"src\": \"hda\"}]}, \"input_format\": \"csv\", \"type\": \"rules-file\"}"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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221 },
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222 "state": "ok",
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223 "stderr": "\u001b[32m\nrrparser 2.6.0\n\u001b[0m\n\u001b[32mFiltering rules:\u001b[0m\n\u001b[32m -> EC numbers (not in): []\u001b[0m\n\u001b[32m -> Diameters: [2, 4, 6, 8, 10, 12, 14, 16]\u001b[0m\n\u001b[32m -> Rule types: all\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32m=> 99 rules found\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32mWriting results...\u001b[0m\n",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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224 "stdout": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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225 "tool_id": "rrparser",
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226 "tool_stderr": "\u001b[32m\nrrparser 2.6.0\n\u001b[0m\n\u001b[32mFiltering rules:\u001b[0m\n\u001b[32m -> EC numbers (not in): []\u001b[0m\n\u001b[32m -> Diameters: [2, 4, 6, 8, 10, 12, 14, 16]\u001b[0m\n\u001b[32m -> Rule types: all\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32m=> 99 rules found\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32mWriting results...\u001b[0m\n",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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227 "tool_stdout": "",
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228 "update_time": "2025-04-02T13:19:23.280174",
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229 "user_email": "planemo@galaxyproject.org",
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230 "user_id": "9e4e5a4b3a855398"
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231 },
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232 "status": "success",
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233 "test_index": 2,
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diff changeset
234 "time_seconds": 17.598353147506714,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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235 "tool_id": "rrparser",
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236 "tool_version": "2.7.0+galaxy2"
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237 },
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238 "has_data": true,
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239 "id": "rrparser-2"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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240 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
241 {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
242 "data": {
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243 "inputs": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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244 "adv|input_conditional_ec|input_ec_in": {
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245 "id": "158df96eaa64fd08",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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246 "src": "hda"
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247 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
248 "adv|input_conditional_ec|input_type": "in",
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diff changeset
249 "rules|file": {
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diff changeset
250 "id": "9b2f4e10cc6dd033",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
251 "src": "hda"
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diff changeset
252 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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253 "rules|type": "rules-file"
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254 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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255 "job": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
256 "command_line": "python -m rrparser --rules_file '/tmp/tmpm3epclar/files/5/2/8/dataset_5289c0a4-efb2-4b52-b8a0-a793e2f2eefe.dat' --input-format 'csv' --diameters '2,4,6,8,10,12,14,16' --output-format csv --rules-dir \"${TMPDIR:-.}\" --outfile '/tmp/tmpm3epclar/job_working_directory/000/7/outputs/dataset_982bef6f-5b22-44b6-abd4-36a81896797b.dat' --ec '/tmp/tmpm3epclar/files/8/0/9/dataset_80995b8a-0c9b-4ef0-8ad6-07eb42b400d5.dat'",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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257 "command_version": "",
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diff changeset
258 "copied_from_job_id": null,
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diff changeset
259 "create_time": "2025-04-02T13:19:33.850122",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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260 "dependencies": [
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diff changeset
261 {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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262 "cacheable": false,
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diff changeset
263 "dependency_resolver": {
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264 "auto_init": true,
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diff changeset
265 "auto_install": true,
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diff changeset
266 "can_uninstall_dependencies": true,
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diff changeset
267 "ensure_channels": "conda-forge,bioconda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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268 "model_class": "CondaDependencyResolver",
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diff changeset
269 "prefix": "/home/rkhaled/miniconda3",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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270 "read_only": false,
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diff changeset
271 "resolver_type": "conda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
272 "resolves_simple_dependencies": true,
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diff changeset
273 "use_local": false,
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diff changeset
274 "versionless": false
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diff changeset
275 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
276 "dependency_type": "conda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
277 "environment_path": "/home/rkhaled/miniconda3/envs/__rrparser@2.7.0",
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diff changeset
278 "exact": true,
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diff changeset
279 "model_class": "MergedCondaDependency",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
280 "name": "rrparser",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
281 "version": "2.7.0"
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282 }
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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283 ],
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
284 "exit_code": 0,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
285 "external_id": "176844",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
286 "galaxy_version": "24.2",
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287 "handler": null,
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diff changeset
288 "history_id": "9df58a1b3ccadf66",
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diff changeset
289 "id": "36e3846a4c0fca27",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
290 "inputs": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
291 "adv|input_conditional_ec|input_ec_in": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
292 "id": "158df96eaa64fd08",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
293 "src": "hda",
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diff changeset
294 "uuid": "80995b8a-0c9b-4ef0-8ad6-07eb42b400d5"
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295 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
296 "rules|file": {
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diff changeset
297 "id": "9b2f4e10cc6dd033",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
298 "src": "hda",
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diff changeset
299 "uuid": "5289c0a4-efb2-4b52-b8a0-a793e2f2eefe"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
300 }
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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301 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
302 "job_messages": [],
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
303 "job_metrics": [],
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
304 "job_runner_name": null,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
305 "job_stderr": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
306 "job_stdout": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
307 "model_class": "Job",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
308 "output_collections": {},
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
309 "outputs": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
310 "out_rules": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
311 "id": "36e3846a4c0fca27",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
312 "src": "hda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
313 "uuid": "982bef6f-5b22-44b6-abd4-36a81896797b"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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314 }
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
315 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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316 "params": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
317 "__input_ext": "\"input\"",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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318 "adv": "{\"compress\": false, \"diameters\": [\"2\", \"4\", \"6\", \"8\", \"10\", \"12\", \"14\", \"16\"], \"input_conditional_ec\": {\"__current_case__\": 1, \"input_ec_in\": {\"values\": [{\"id\": 6, \"src\": \"hda\"}]}, \"input_type\": \"in\"}, \"input_scores_file\": null}",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
319 "chromInfo": "\"/tmp/tmpm3epclar/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
320 "dbkey": "\"?\"",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
321 "rules": "{\"__current_case__\": 3, \"file\": {\"values\": [{\"id\": 5, \"src\": \"hda\"}]}, \"input_format\": \"csv\", \"type\": \"rules-file\"}"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
322 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
323 "state": "ok",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
324 "stderr": "\u001b[32m\nrrparser 2.6.0\n\u001b[0m\n\u001b[32mFiltering rules:\u001b[0m\n\u001b[32m -> EC numbers (in): ['1.1.1.202', '2.3.1.40', 'NOEC', '1.2.3', '2.4.1\\n']\u001b[0m\n\u001b[32m -> Diameters: [2, 4, 6, 8, 10, 12, 14, 16]\u001b[0m\n\u001b[32m -> Rule types: all\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32m=> 31 rules found\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32mWriting results...\u001b[0m\n",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
325 "stdout": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
326 "tool_id": "rrparser",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
327 "tool_stderr": "\u001b[32m\nrrparser 2.6.0\n\u001b[0m\n\u001b[32mFiltering rules:\u001b[0m\n\u001b[32m -> EC numbers (in): ['1.1.1.202', '2.3.1.40', 'NOEC', '1.2.3', '2.4.1\\n']\u001b[0m\n\u001b[32m -> Diameters: [2, 4, 6, 8, 10, 12, 14, 16]\u001b[0m\n\u001b[32m -> Rule types: all\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32m=> 31 rules found\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32mWriting results...\u001b[0m\n",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
328 "tool_stdout": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
329 "update_time": "2025-04-02T13:19:40.770934",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
330 "user_email": "planemo@galaxyproject.org",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
331 "user_id": "9e4e5a4b3a855398"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
332 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
333 "status": "success",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
334 "test_index": 3,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
335 "time_seconds": 17.23330569267273,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
336 "tool_id": "rrparser",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
337 "tool_version": "2.7.0+galaxy2"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
338 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
339 "has_data": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
340 "id": "rrparser-3"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
341 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
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diff changeset
342 {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
343 "data": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
344 "inputs": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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diff changeset
345 "adv|input_conditional_ec|input_ec_out": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
346 "id": "5a3f6d2aa5cbbf69",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
347 "src": "hda"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
348 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
349 "adv|input_conditional_ec|input_type": "out",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
350 "rules|file": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
351 "id": "20fb8cb0d7ee14e2",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
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diff changeset
352 "src": "hda"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
353 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
354 "rules|type": "rules-file"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
355 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
356 "job": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
357 "command_line": "python -m rrparser --rules_file '/tmp/tmpm3epclar/files/a/3/4/dataset_a348e61f-9252-4235-bd19-a9a9055b3ed9.dat' --input-format 'csv' --diameters '2,4,6,8,10,12,14,16' --output-format csv --rules-dir \"${TMPDIR:-.}\" --outfile '/tmp/tmpm3epclar/job_working_directory/000/10/outputs/dataset_aa8ef57c-61dd-4229-a390-ac9db19b9df1.dat' --ecx '/tmp/tmpm3epclar/files/6/a/a/dataset_6aad8801-3891-438c-9a0d-8ae38e74ffc6.dat'",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
358 "command_version": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
359 "copied_from_job_id": null,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
360 "create_time": "2025-04-02T13:19:51.381242",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
361 "dependencies": [
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
362 {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
363 "cacheable": false,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
364 "dependency_resolver": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
365 "auto_init": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
366 "auto_install": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
367 "can_uninstall_dependencies": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
368 "ensure_channels": "conda-forge,bioconda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
369 "model_class": "CondaDependencyResolver",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
370 "prefix": "/home/rkhaled/miniconda3",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
371 "read_only": false,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
372 "resolver_type": "conda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
373 "resolves_simple_dependencies": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
374 "use_local": false,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
375 "versionless": false
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
376 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
377 "dependency_type": "conda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
378 "environment_path": "/home/rkhaled/miniconda3/envs/__rrparser@2.7.0",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
379 "exact": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
380 "model_class": "MergedCondaDependency",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
381 "name": "rrparser",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
382 "version": "2.7.0"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
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diff changeset
383 }
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
384 ],
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
385 "exit_code": 0,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
386 "external_id": "177107",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
387 "galaxy_version": "24.2",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
388 "handler": null,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
389 "history_id": "9b2f4e10cc6dd033",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
390 "id": "dce39e11a9fe3b39",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
391 "inputs": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
392 "adv|input_conditional_ec|input_ec_out": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
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parents: 8
diff changeset
393 "id": "5a3f6d2aa5cbbf69",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
394 "src": "hda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
395 "uuid": "6aad8801-3891-438c-9a0d-8ae38e74ffc6"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
396 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
397 "rules|file": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
398 "id": "20fb8cb0d7ee14e2",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
399 "src": "hda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
400 "uuid": "a348e61f-9252-4235-bd19-a9a9055b3ed9"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
401 }
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
402 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
403 "job_messages": [],
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
404 "job_metrics": [],
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
405 "job_runner_name": null,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
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diff changeset
406 "job_stderr": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
407 "job_stdout": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
408 "model_class": "Job",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
409 "output_collections": {},
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
410 "outputs": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
411 "out_rules": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
412 "id": "dce39e11a9fe3b39",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
413 "src": "hda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
414 "uuid": "aa8ef57c-61dd-4229-a390-ac9db19b9df1"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
415 }
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
416 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
417 "params": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
418 "__input_ext": "\"input\"",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
419 "adv": "{\"compress\": false, \"diameters\": [\"2\", \"4\", \"6\", \"8\", \"10\", \"12\", \"14\", \"16\"], \"input_conditional_ec\": {\"__current_case__\": 2, \"input_ec_out\": {\"values\": [{\"id\": 9, \"src\": \"hda\"}]}, \"input_type\": \"out\"}, \"input_scores_file\": null}",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
420 "chromInfo": "\"/tmp/tmpm3epclar/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
421 "dbkey": "\"?\"",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
422 "rules": "{\"__current_case__\": 3, \"file\": {\"values\": [{\"id\": 8, \"src\": \"hda\"}]}, \"input_format\": \"csv\", \"type\": \"rules-file\"}"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
423 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
424 "state": "ok",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
425 "stderr": "\u001b[32m\nrrparser 2.6.0\n\u001b[0m\n\u001b[32mFiltering rules:\u001b[0m\n\u001b[32m -> EC numbers (not in): ['1.1.1.202', '2.3.1.40', 'NOEC', '1.2.3', '2.4.1\\n']\u001b[0m\n\u001b[32m -> Diameters: [2, 4, 6, 8, 10, 12, 14, 16]\u001b[0m\n\u001b[32m -> Rule types: all\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32m=> 68 rules found\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32mWriting results...\u001b[0m\n",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
426 "stdout": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
427 "tool_id": "rrparser",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
428 "tool_stderr": "\u001b[32m\nrrparser 2.6.0\n\u001b[0m\n\u001b[32mFiltering rules:\u001b[0m\n\u001b[32m -> EC numbers (not in): ['1.1.1.202', '2.3.1.40', 'NOEC', '1.2.3', '2.4.1\\n']\u001b[0m\n\u001b[32m -> Diameters: [2, 4, 6, 8, 10, 12, 14, 16]\u001b[0m\n\u001b[32m -> Rule types: all\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32m=> 68 rules found\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32mWriting results...\u001b[0m\n",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
429 "tool_stdout": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
430 "update_time": "2025-04-02T13:19:58.249593",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
431 "user_email": "planemo@galaxyproject.org",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
432 "user_id": "9e4e5a4b3a855398"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
433 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
434 "status": "success",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
435 "test_index": 4,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
436 "time_seconds": 17.527034759521484,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
437 "tool_id": "rrparser",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
438 "tool_version": "2.7.0+galaxy2"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
439 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
440 "has_data": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
441 "id": "rrparser-4"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
442 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
443 {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
444 "data": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
445 "inputs": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
446 "adv|input_scores_file": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
447 "id": "e518de1807107326",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
448 "src": "hda"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
449 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
450 "rules|file": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
451 "id": "1ecde2b521ddcb43",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
452 "src": "hda"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
453 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
454 "rules|type": "rules-file"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
455 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
456 "job": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
457 "command_line": "python -m rrparser --rules_file '/tmp/tmpm3epclar/files/9/c/c/dataset_9cc4cc4e-4aa9-4f11-ba74-f94f9ff8bd58.dat' --input-format 'csv' --diameters '2,4,6,8,10,12,14,16' --output-format csv --rules-dir \"${TMPDIR:-.}\" --outfile '/tmp/tmpm3epclar/job_working_directory/000/13/outputs/dataset_7b814b69-02aa-4a6a-87e9-df3c7506f8e0.dat' --scores '/tmp/tmpm3epclar/files/9/c/9/dataset_9c94b8d9-170b-42d3-be35-8ec09d2f651c.dat'",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
458 "command_version": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
459 "copied_from_job_id": null,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
460 "create_time": "2025-04-02T13:20:08.972566",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
461 "dependencies": [
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
462 {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
463 "cacheable": false,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
464 "dependency_resolver": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
465 "auto_init": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
466 "auto_install": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
467 "can_uninstall_dependencies": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
468 "ensure_channels": "conda-forge,bioconda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
469 "model_class": "CondaDependencyResolver",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
470 "prefix": "/home/rkhaled/miniconda3",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
471 "read_only": false,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
472 "resolver_type": "conda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
473 "resolves_simple_dependencies": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
474 "use_local": false,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
475 "versionless": false
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
476 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
477 "dependency_type": "conda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
478 "environment_path": "/home/rkhaled/miniconda3/envs/__rrparser@2.7.0",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
479 "exact": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
480 "model_class": "MergedCondaDependency",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
481 "name": "rrparser",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
482 "version": "2.7.0"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
483 }
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
484 ],
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
485 "exit_code": 0,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
486 "external_id": "177372",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
487 "galaxy_version": "24.2",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
488 "handler": null,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
489 "history_id": "158df96eaa64fd08",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
490 "id": "bec2ef2bb04a8edc",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
491 "inputs": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
492 "adv|input_scores_file": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
493 "id": "e518de1807107326",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
494 "src": "hda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
495 "uuid": "9c94b8d9-170b-42d3-be35-8ec09d2f651c"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
496 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
497 "rules|file": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
498 "id": "1ecde2b521ddcb43",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
499 "src": "hda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
500 "uuid": "9cc4cc4e-4aa9-4f11-ba74-f94f9ff8bd58"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
501 }
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
502 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
503 "job_messages": [],
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
504 "job_metrics": [],
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
505 "job_runner_name": null,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
506 "job_stderr": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
507 "job_stdout": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
508 "model_class": "Job",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
509 "output_collections": {},
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
510 "outputs": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
511 "out_rules": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
512 "id": "bec2ef2bb04a8edc",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
513 "src": "hda",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
514 "uuid": "7b814b69-02aa-4a6a-87e9-df3c7506f8e0"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
515 }
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
516 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
517 "params": {
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
518 "__input_ext": "\"input\"",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
519 "adv": "{\"compress\": false, \"diameters\": [\"2\", \"4\", \"6\", \"8\", \"10\", \"12\", \"14\", \"16\"], \"input_conditional_ec\": {\"__current_case__\": 0, \"input_type\": \"no\"}, \"input_scores_file\": {\"values\": [{\"id\": 12, \"src\": \"hda\"}]}}",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
520 "chromInfo": "\"/tmp/tmpm3epclar/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
521 "dbkey": "\"?\"",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
522 "rules": "{\"__current_case__\": 3, \"file\": {\"values\": [{\"id\": 11, \"src\": \"hda\"}]}, \"input_format\": \"csv\", \"type\": \"rules-file\"}"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
523 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
524 "state": "ok",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
525 "stderr": "\u001b[32m\nrrparser 2.6.0\n\u001b[0m\n\u001b[32mFiltering rules:\u001b[0m\n\u001b[32m -> EC numbers (not in): []\u001b[0m\n\u001b[32m -> Diameters: [2, 4, 6, 8, 10, 12, 14, 16]\u001b[0m\n\u001b[32m -> Rule types: all\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32m=> 99 rules found\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[33mRule IDs {'foo'} found in scores file but not in results. Its score will not be used.\u001b[0m\n\u001b[32mWriting results...\u001b[0m\n",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
526 "stdout": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
527 "tool_id": "rrparser",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
528 "tool_stderr": "\u001b[32m\nrrparser 2.6.0\n\u001b[0m\n\u001b[32mFiltering rules:\u001b[0m\n\u001b[32m -> EC numbers (not in): []\u001b[0m\n\u001b[32m -> Diameters: [2, 4, 6, 8, 10, 12, 14, 16]\u001b[0m\n\u001b[32m -> Rule types: all\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[32m=> 99 rules found\u001b[0m\n\u001b[32m\u001b[0m\n\u001b[33mRule IDs {'foo'} found in scores file but not in results. Its score will not be used.\u001b[0m\n\u001b[32mWriting results...\u001b[0m\n",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
529 "tool_stdout": "",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
530 "update_time": "2025-04-02T13:20:15.699056",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
531 "user_email": "planemo@galaxyproject.org",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
532 "user_id": "9e4e5a4b3a855398"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
533 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
534 "status": "success",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
535 "test_index": 5,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
536 "time_seconds": 17.1466064453125,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
537 "tool_id": "rrparser",
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
538 "tool_version": "2.7.0+galaxy2"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
539 },
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
540 "has_data": true,
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
541 "id": "rrparser-5"
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
542 }
c320aba02826 planemo upload for repository https://github.com/brsynth/rrparser commit ed7fa4533be443a83f14dd931dcdf30806c170a7
tduigou
parents: 8
diff changeset
543 ],
8
2ec2fae2a58d planemo upload for repository https://github.com/brsynth/rrparser commit d70e0f16e6cf8c5a62ba6cd8e4873ee44a717d74-dirty
tduigou
parents:
diff changeset
544 "version": "0.1"
2ec2fae2a58d planemo upload for repository https://github.com/brsynth/rrparser commit d70e0f16e6cf8c5a62ba6cd8e4873ee44a717d74-dirty
tduigou
parents:
diff changeset
545 }