Mercurial > repos > rdvelazquez > hyphy_fubar

annotate macros.xml @ 9:55dd19bffb00 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
author rdvelazquez
date Tue, 08 Jan 2019 10:59:21 -0500
parents b19b7712ab0a
children da4fd8c3ad0c
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a52fcdeacf3d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'32e39857cb09a483e607ddd223f3783bff328cb2\n'-dirty
rdvelazquez
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1 <?xml version="1.0"?>
a52fcdeacf3d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'32e39857cb09a483e607ddd223f3783bff328cb2\n'-dirty
rdvelazquez
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2 <macros>
9
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
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3 <xml name="citations">
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
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4 <citations>
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
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5 <citation type="doi">10.1093/bioinformatics/bti079</citation>
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
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6 <yield />
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
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7 </citations>
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents: 7
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8 </xml>
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
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9 <token name="@VERSION@">2.3.14</token>
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
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10 <xml name="requirements">
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
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11 <requirements>
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
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12 <requirement type="package" version="@VERSION@">hyphy</requirement>
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
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13 <yield />
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
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14 </requirements>
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
parents: 7
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15 </xml>
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
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16 <token name="@HYPHY_INVOCATION@"><![CDATA[export HYPHY=`which HYPHYMP` &&
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fa2236bc5ab2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
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17 export HYPHY_PATH=`dirname \$HYPHY` &&
fa2236bc5ab2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'bff24ad0eccc4083de076adc029c5c3ac50e2852\n'-dirty
rdvelazquez
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18 export HYPHY_LIB=`readlink -f \$HYPHY_PATH/../lib/hyphy` &&
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55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
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19 cat tool_params | HYPHYMP LIBPATH=\$HYPHY_LIB ]]>
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
rdvelazquez
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20 </token>
55dd19bffb00 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hyphy/ commit b'17327d46ff082448f0a0fc3b6827f5d9d6124a10\n'-dirty
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21 </macros>