diff output.json @ 13:5b16f2911491 draft default tip

planemo upload for repository https://github.com/brsynth commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
author tduigou
date Fri, 23 May 2025 13:47:21 +0000
parents ee28ec28140d
children
line wrap: on
line diff
--- a/output.json	Fri May 23 12:45:20 2025 +0000
+++ b/output.json	Fri May 23 13:47:21 2025 +0000
@@ -13,29 +13,29 @@
                     "db_uri": "postgresql://postgres:RK17@localhost:5432/test_fragments_db",
                     "fragment_column": "fragment",
                     "input": {
-                        "id": "21ac64467e79a23d",
+                        "id": "3e55d5e4bd660a72",
                         "src": "hda"
                     },
                     "sequence_column": "sequence",
                     "table": "sample"
                 },
                 "job": {
-                    "command_line": "mkdir 'outdir' && python '/home/rkhaled/galaxytools/tools/get_db_data/get_db_info.py' --input '/tmp/tmp20abmio8/files/0/0/5/dataset_00567b2f-5032-43b8-a612-c16e8ac097ca.dat' --sequence_column 'sequence' --annotation_columns 'annotation' --db_uri 'postgresql://postgres:RK17__at__localhost:5432/test_fragments_db' --table 'sample' --fragment_column 'fragment' --output 'outdir'",
+                    "command_line": "mkdir 'outdir' && python '/home/rkhaled/galaxytools/tools/get_db_data/get_db_info.py' --input '/tmp/tmpkx9eg1ax/files/b/7/5/dataset_b7584f2c-5438-48d4-823c-b2c3f4274df3.dat' --sequence_column 'sequence' --annotation_columns 'annotation' --db_uri 'postgresql://postgres:RK17__at__localhost:5432/test_fragments_db' --table 'sample' --fragment_column 'fragment' --output 'outdir'",
                     "command_version": null,
                     "copied_from_job_id": null,
-                    "create_time": "2025-05-23T12:44:22.666476",
+                    "create_time": "2025-05-23T13:46:12.315974",
                     "dependencies": [],
                     "exit_code": 0,
-                    "external_id": "196443",
+                    "external_id": "224853",
                     "galaxy_version": "24.2",
                     "handler": null,
-                    "history_id": "21ac64467e79a23d",
-                    "id": "16392a867bb52b96",
+                    "history_id": "3e55d5e4bd660a72",
+                    "id": "024baef40a002eb4",
                     "inputs": {
                         "input": {
-                            "id": "21ac64467e79a23d",
+                            "id": "3e55d5e4bd660a72",
                             "src": "hda",
-                            "uuid": "00567b2f-5032-43b8-a612-c16e8ac097ca"
+                            "uuid": "b7584f2c-5438-48d4-823c-b2c3f4274df3"
                         }
                     },
                     "job_messages": [],
@@ -46,36 +46,76 @@
                     "model_class": "Job",
                     "output_collections": {
                         "output_gb": {
-                            "id": "21ac64467e79a23d",
+                            "id": "3e55d5e4bd660a72",
                             "src": "hdca"
                         }
                     },
                     "outputs": {
-                        "__new_primary_file_output_gb|ACP10001AaCbbBS__": {
-                            "id": "16392a867bb52b96",
+                        "__new_primary_file_output_gb|part_A__": {
+                            "id": "024baef40a002eb4",
                             "src": "hda",
-                            "uuid": "f6166465-8329-42d3-8b8d-634164cb00d1"
+                            "uuid": "93fbeb5d-074d-48e6-9eec-fd7445ec81dd"
+                        },
+                        "__new_primary_file_output_gb|part_B__": {
+                            "id": "26cae1ed3aa61beb",
+                            "src": "hda",
+                            "uuid": "d9595d0c-e479-4529-8c8f-92910ba304e2"
+                        },
+                        "__new_primary_file_output_gb|part_C__": {
+                            "id": "63a16c870de58b5c",
+                            "src": "hda",
+                            "uuid": "f7f751b7-bc0a-496e-999f-a1eaded9db2c"
                         },
-                        "__new_primary_file_output_gb|CFP10002AaCbbBS__": {
-                            "id": "f19b79cec441f6c0",
+                        "__new_primary_file_output_gb|part_D__": {
+                            "id": "d5938cf81457dc9d",
                             "src": "hda",
-                            "uuid": "27c7fa5e-029c-4c52-bfb8-281bc4fd581b"
+                            "uuid": "cc77f187-47d8-495e-b951-70ade982ca17"
+                        },
+                        "__new_primary_file_output_gb|part_E__": {
+                            "id": "a522ff593fd68eb0",
+                            "src": "hda",
+                            "uuid": "42671fc1-73de-4a25-b090-242c9c233349"
+                        },
+                        "__new_primary_file_output_gb|part_F__": {
+                            "id": "4790cce11de15e49",
+                            "src": "hda",
+                            "uuid": "28fa25eb-6a6f-422b-b18f-cc27335d0057"
                         },
-                        "__new_primary_file_output_gb|QWE10004AaCbbBS__": {
-                            "id": "c5caf62a8c51ce22",
+                        "__new_primary_file_output_gb|part_G__": {
+                            "id": "fd0d5f6f6b618b2e",
                             "src": "hda",
-                            "uuid": "79161280-74b3-4786-9d94-d5e616a85047"
+                            "uuid": "2f9a4438-cc15-4157-8d4e-76e265f001e5"
+                        },
+                        "__new_primary_file_output_gb|part_H__": {
+                            "id": "55923ec0abca33c6",
+                            "src": "hda",
+                            "uuid": "ec95f6c6-83ce-4908-a438-4b75b70f300b"
+                        },
+                        "__new_primary_file_output_gb|part_I__": {
+                            "id": "a7c1ac8dd0e0cd88",
+                            "src": "hda",
+                            "uuid": "ae511dd8-952c-4402-9520-d158966dd7f2"
                         },
-                        "__new_primary_file_output_gb|XYZ10003AaCbbBS__": {
-                            "id": "33cdc5f5dcf09503",
+                        "__new_primary_file_output_gb|part_J__": {
+                            "id": "03ce4e2872cac014",
                             "src": "hda",
-                            "uuid": "3cc67d62-a001-42bf-9628-c508daf0934c"
+                            "uuid": "143078c2-aa8d-4f30-858a-dcc96d854582"
+                        },
+                        "__new_primary_file_output_gb|part_K__": {
+                            "id": "7036040c587c5933",
+                            "src": "hda",
+                            "uuid": "6287af7a-a2ad-4348-a4d8-9bc78969a188"
+                        },
+                        "__new_primary_file_output_gb|part_L__": {
+                            "id": "bf44ed04fc51b238",
+                            "src": "hda",
+                            "uuid": "a32e4a55-fb89-434c-a222-506576b7fc34"
                         }
                     },
                     "params": {
                         "__input_ext": "\"input\"",
                         "annotation_columns": "\"annotation\"",
-                        "chromInfo": "\"/tmp/tmp20abmio8/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"",
+                        "chromInfo": "\"/tmp/tmpkx9eg1ax/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"",
                         "db_uri": "\"postgresql://postgres:RK17@localhost:5432/test_fragments_db\"",
                         "dbkey": "\"?\"",
                         "fragment_column": "\"fragment\"",
@@ -88,13 +128,13 @@
                     "tool_id": "get_DB_data",
                     "tool_stderr": "",
                     "tool_stdout": "Container 'test_fragments_db' is already running.\nConnected to database.\n",
-                    "update_time": "2025-05-23T12:44:29.552502",
+                    "update_time": "2025-05-23T13:46:18.962770",
                     "user_email": "planemo@galaxyproject.org",
-                    "user_id": "21ac64467e79a23d"
+                    "user_id": "3e55d5e4bd660a72"
                 },
                 "status": "success",
                 "test_index": 0,
-                "time_seconds": 17.09453797340393,
+                "time_seconds": 16.930965185165405,
                 "tool_id": "get_DB_data",
                 "tool_version": "0.1.0+galaxy0"
             },