Mercurial > repos > tduigou > domestication

annotate output.json @ 8:4bfdec0be6b1 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
author tduigou
date Fri, 23 May 2025 09:04:43 +0000
parents 70895bec2486
children c52967fb95da
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
1 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
2 "summary": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
3 "num_errors": 0,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
4 "num_failures": 0,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
5 "num_skips": 0,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
6 "num_tests": 2
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
7 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
8 "tests": [
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
9 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
10 "data": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
11 "inputs": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
12 "adv|allow_edits": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
13 "adv|use_file_names_as_ids": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
14 "domestication_csv": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
15 "id": "3f0c528bcd0d2af0",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
16 "src": "hda"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
17 },
1
bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
18 "genbank_files": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
19 "id": "2d588720727ac897",
1
bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
20 "src": "hdca"
bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
21 },
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
22 "methylation_protection": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
23 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
24 "job": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
25 "command_line": "mkdir 'metoutdir_gb' && mkdir 'outdir_zip' && mkdir 'outdir_gb'&& cp '/tmp/tmpa__rr6q2/files/1/8/d/dataset_18d1bdeb-a69c-4f9a-8d59-4d4d12fbff4c.dat' 'domestication_csv.csv' && python '/home/rkhaled/galaxytools/tools/domestication/domestication.py' --files_to_domestication '/tmp/tmpa__rr6q2/files/f/3/b/dataset_f3b3d5cf-5f7f-4a6d-8c94-e7927144f3eb.dat,/tmp/tmpa__rr6q2/files/f/f/6/dataset_ff62cd6f-ecf0-46ea-ac72-3cc78a217ef8.dat,/tmp/tmpa__rr6q2/files/8/c/d/dataset_8cd82e26-da60-4c91-bb80-d65d9ac0864d.dat,/tmp/tmpa__rr6q2/files/a/f/6/dataset_af6f5158-3c00-4e30-a07f-b9cee1381d6c.dat,/tmp/tmpa__rr6q2/files/b/9/7/dataset_b97d206b-3b81-41ad-96a6-462a3ebcbbf2.dat,/tmp/tmpa__rr6q2/files/a/8/9/dataset_a8913c13-0cca-4e1e-9496-2c7f0bbcc485.dat,/tmp/tmpa__rr6q2/files/6/c/c/dataset_6cc8ecc8-2001-4b71-8cd5-3d42f368a626.dat' --csv_file 'domestication_csv.csv' --file_name_mapping '/tmp/tmpa__rr6q2/files/f/3/b/dataset_f3b3d5cf-5f7f-4a6d-8c94-e7927144f3eb.dat:p3_2_CAG.gb,/tmp/tmpa__rr6q2/files/f/f/6/dataset_ff62cd6f-ecf0-46ea-ac72-3cc78a217ef8.dat:p7_gfp_sequence.gb,/tmp/tmpa__rr6q2/files/8/c/d/dataset_8cd82e26-da60-4c91-bb80-d65d9ac0864d.dat:p14_CMVp.gb,/tmp/tmpa__rr6q2/files/a/f/6/dataset_af6f5158-3c00-4e30-a07f-b9cee1381d6c.dat:p16_bGHpolyA.gb,/tmp/tmpa__rr6q2/files/b/9/7/dataset_b97d206b-3b81-41ad-96a6-462a3ebcbbf2.dat:p18_CMVp.gb,/tmp/tmpa__rr6q2/files/a/8/9/dataset_a8913c13-0cca-4e1e-9496-2c7f0bbcc485.dat:p19_mNeoGreen.gb,/tmp/tmpa__rr6q2/files/6/c/c/dataset_6cc8ecc8-2001-4b71-8cd5-3d42f368a626.dat:p22_PGKpolyA.gb' --use_file_names_as_id 'true' --allow_edits 'true' --output_dom 'output_zip.zip' --output_gb_dom 'outdir_gb' --output_methprot 'metoutdir_gb' --methylation_protection 'false' && cp 'output_zip.zip' '/tmp/tmpa__rr6q2/job_working_directory/000/9/outputs/dataset_3847af4a-c6f8-4bc2-92e6-a5111f36e863.dat'",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
26 "command_version": "",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
27 "copied_from_job_id": null,
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
28 "create_time": "2025-05-23T09:02:47.568318",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
29 "dependencies": [],
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
30 "exit_code": 0,
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
31 "external_id": "59522",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
32 "galaxy_version": "24.2",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
33 "handler": null,
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
34 "history_id": "2d588720727ac897",
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
35 "id": "05d1fab5f2f95c6e",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
36 "inputs": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
37 "domestication_csv": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
38 "id": "3f0c528bcd0d2af0",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
39 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
40 "uuid": "18d1bdeb-a69c-4f9a-8d59-4d4d12fbff4c"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
41 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
42 "genbank_files1": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
43 "id": "2d588720727ac897",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
44 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
45 "uuid": "f3b3d5cf-5f7f-4a6d-8c94-e7927144f3eb"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
46 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
47 "genbank_files2": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
48 "id": "62972d51292f48e6",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
49 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
50 "uuid": "ff62cd6f-ecf0-46ea-ac72-3cc78a217ef8"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
51 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
52 "genbank_files3": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
53 "id": "e362c0fcc265e8f8",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
54 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
55 "uuid": "8cd82e26-da60-4c91-bb80-d65d9ac0864d"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
56 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
57 "genbank_files4": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
58 "id": "9106613ee8ff8561",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
59 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
60 "uuid": "af6f5158-3c00-4e30-a07f-b9cee1381d6c"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
61 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
62 "genbank_files5": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
63 "id": "0973ce805f0b9fc9",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
64 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
65 "uuid": "b97d206b-3b81-41ad-96a6-462a3ebcbbf2"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
66 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
67 "genbank_files6": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
68 "id": "3f7b9edb7f21ca84",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
69 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
70 "uuid": "a8913c13-0cca-4e1e-9496-2c7f0bbcc485"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
71 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
72 "genbank_files7": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
73 "id": "898926e359e5028c",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
74 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
75 "uuid": "6cc8ecc8-2001-4b71-8cd5-3d42f368a626"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
76 }
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
77 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
78 "job_messages": [],
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
79 "job_metrics": [],
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
80 "job_runner_name": null,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
81 "job_stderr": "",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
82 "job_stdout": "",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
83 "model_class": "Job",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
84 "output_collections": {
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
85 "domesticated_gb": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
86 "id": "62972d51292f48e6",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
87 "src": "hdca"
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
88 }
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
89 },
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
90 "outputs": {
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
91 "__new_primary_file_domesticated_gb|p14_CMVp__": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
92 "id": "0481fa54d30635c9",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
93 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
94 "uuid": "a0555d82-443f-4b4b-8431-2a9d4e049017"
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
95 },
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
96 "__new_primary_file_domesticated_gb|p16_bGHpolyA__": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
97 "id": "813bd8a24377d169",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
98 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
99 "uuid": "e506a4e3-7524-4360-abe1-b49ed99833d7"
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
100 },
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
101 "__new_primary_file_domesticated_gb|p18_CMVp__": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
102 "id": "d79d6af225946b08",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
103 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
104 "uuid": "851cdd02-8f5a-400a-9b51-483c43d67028"
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
105 },
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
106 "__new_primary_file_domesticated_gb|p19_mNeoGreen__": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
107 "id": "3ab85ee8e71bbdd5",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
108 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
109 "uuid": "118d7f40-4850-466b-9f40-e360f1748011"
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
110 },
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
111 "__new_primary_file_domesticated_gb|p22_PGKpolyA__": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
112 "id": "5480ebfe4604885a",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
113 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
114 "uuid": "b82fcc71-a34f-44f8-9dcf-546a10a5f2d6"
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
115 },
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
116 "__new_primary_file_domesticated_gb|p3_2_CAG__": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
117 "id": "f174fd93dd20b3fc",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
118 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
119 "uuid": "fa38ea29-3950-4e40-aed2-427b47597fc7"
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
120 },
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
121 "__new_primary_file_domesticated_gb|p7_gfp_sequence__": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
122 "id": "58f99e5516a773cd",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
123 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
124 "uuid": "538b66c4-b4d0-41b8-9355-afadc944621c"
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
125 },
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
126 "output_zip": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
127 "id": "05d1fab5f2f95c6e",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
128 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
129 "uuid": "3847af4a-c6f8-4bc2-92e6-a5111f36e863"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
130 }
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
131 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
132 "params": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
133 "__input_ext": "\"input\"",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
134 "adv": "{\"allow_edits\": true, \"use_file_names_as_ids\": true}",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
135 "chromInfo": "\"/tmp/tmpa__rr6q2/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
136 "dbkey": "\"?\"",
1
bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
137 "genbank_files": "{\"values\": [{\"id\": 1, \"src\": \"hdca\"}]}",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
138 "methylation_protection": "false"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
139 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
140 "state": "ok",
7
70895bec2486 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 4
diff changeset
141 "stderr": "\rrecord: 0%| | 0/7 [00:00<?, ?it/s, now=None]\rrecord: 43%|\u2588\u2588\u2588\u2588\u258e | 3/7 [00:01<00:02, 1.75it/s, now=None]\r \r",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
142 "stdout": "Part names were not truncated\n",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
143 "tool_id": "domestication",
7
70895bec2486 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 4
diff changeset
144 "tool_stderr": "\rrecord: 0%| | 0/7 [00:00<?, ?it/s, now=None]\rrecord: 43%|\u2588\u2588\u2588\u2588\u258e | 3/7 [00:01<00:02, 1.75it/s, now=None]\r \r",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
145 "tool_stdout": "Part names were not truncated\n",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
146 "update_time": "2025-05-23T09:02:58.973787",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
147 "user_email": "planemo@galaxyproject.org",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
148 "user_id": "2d588720727ac897"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
149 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
150 "status": "success",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
151 "test_index": 0,
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
152 "time_seconds": 34.70007658004761,
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
153 "tool_id": "domestication",
1
bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
154 "tool_version": "0.1.0+galaxy1"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
155 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
156 "has_data": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
157 "id": "domestication-0"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
158 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
159 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
160 "data": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
161 "inputs": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
162 "adv|allow_edits": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
163 "adv|use_file_names_as_ids": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
164 "domestication_csv": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
165 "id": "0ac23d4d0b88827c",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
166 "src": "hda"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
167 },
1
bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
168 "genbank_files": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
169 "id": "e362c0fcc265e8f8",
1
bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
170 "src": "hdca"
bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
171 },
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
172 "methylation_protection": true
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
173 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
174 "job": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
175 "command_line": "mkdir 'metoutdir_gb' && mkdir 'outdir_zip' && mkdir 'outdir_gb'&& cp '/tmp/tmpa__rr6q2/files/8/9/c/dataset_89c41e63-3985-4c33-9154-735d98f3f2bb.dat' 'domestication_csv.csv' && python '/home/rkhaled/galaxytools/tools/domestication/domestication.py' --files_to_domestication '/tmp/tmpa__rr6q2/files/3/7/a/dataset_37a61c0f-4043-404f-97c9-1b2e4b277a0b.dat,/tmp/tmpa__rr6q2/files/a/c/d/dataset_acd5b8cd-260a-4eed-bbaa-083097afd437.dat,/tmp/tmpa__rr6q2/files/b/4/2/dataset_b429cf4a-5fc0-4b2f-a27f-7b7d2da197dd.dat,/tmp/tmpa__rr6q2/files/6/4/3/dataset_643037ae-a752-4ce5-80e9-921fa8b24d3b.dat,/tmp/tmpa__rr6q2/files/d/c/e/dataset_dce00e9a-8b99-4bce-a1c2-b17377db99cf.dat,/tmp/tmpa__rr6q2/files/0/2/0/dataset_020c2948-6eb0-4860-b17b-a3f35d138965.dat,/tmp/tmpa__rr6q2/files/2/c/6/dataset_2c6f9cf6-bf93-4c97-9ea8-17ad34702969.dat' --csv_file 'domestication_csv.csv' --file_name_mapping '/tmp/tmpa__rr6q2/files/3/7/a/dataset_37a61c0f-4043-404f-97c9-1b2e4b277a0b.dat:p3_2_CAG.gb,/tmp/tmpa__rr6q2/files/a/c/d/dataset_acd5b8cd-260a-4eed-bbaa-083097afd437.dat:p7_gfp_sequence.gb,/tmp/tmpa__rr6q2/files/b/4/2/dataset_b429cf4a-5fc0-4b2f-a27f-7b7d2da197dd.dat:p14_CMVp.gb,/tmp/tmpa__rr6q2/files/6/4/3/dataset_643037ae-a752-4ce5-80e9-921fa8b24d3b.dat:p16_bGHpolyA.gb,/tmp/tmpa__rr6q2/files/d/c/e/dataset_dce00e9a-8b99-4bce-a1c2-b17377db99cf.dat:p18_CMVp.gb,/tmp/tmpa__rr6q2/files/0/2/0/dataset_020c2948-6eb0-4860-b17b-a3f35d138965.dat:p19_mNeoGreen.gb,/tmp/tmpa__rr6q2/files/2/c/6/dataset_2c6f9cf6-bf93-4c97-9ea8-17ad34702969.dat:p22_PGKpolyA.gb' --use_file_names_as_id 'true' --allow_edits 'true' --output_dom 'output_zip.zip' --output_gb_dom 'outdir_gb' --output_methprot 'metoutdir_gb' --methylation_protection 'true' && cp 'output_zip.zip' '/tmp/tmpa__rr6q2/job_working_directory/000/18/outputs/dataset_257e63c3-87b5-459a-b118-921e6217abe8.dat'",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
176 "command_version": "",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
177 "copied_from_job_id": null,
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
178 "create_time": "2025-05-23T09:03:22.156202",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
179 "dependencies": [
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
180 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
181 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
182 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
183 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
184 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
185 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
186 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
187 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
188 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
189 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
190 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
191 "resolves_simple_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
192 "use_local": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
193 "versionless": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
194 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
195 "dependency_type": "conda",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
196 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
197 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
198 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
199 "name": "flametree",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
200 "version": "0.1.11"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
201 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
202 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
203 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
204 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
205 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
206 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
207 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
208 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
209 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
210 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
211 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
212 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
213 "resolves_simple_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
214 "use_local": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
215 "versionless": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
216 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
217 "dependency_type": "conda",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
218 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
219 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
220 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
221 "name": "biopython",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
222 "version": "1.85"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
223 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
224 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
225 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
226 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
227 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
228 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
229 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
230 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
231 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
232 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
233 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
234 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
235 "resolves_simple_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
236 "use_local": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
237 "versionless": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
238 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
239 "dependency_type": "conda",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
240 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
241 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
242 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
243 "name": "proglog",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
244 "version": "0.1.10"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
245 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
246 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
247 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
248 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
249 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
250 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
251 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
252 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
253 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
254 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
255 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
256 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
257 "resolves_simple_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
258 "use_local": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
259 "versionless": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
260 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
261 "dependency_type": "conda",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
262 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
263 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
264 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
265 "name": "genedom",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
266 "version": "0.2.2"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
267 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
268 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
269 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
270 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
271 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
272 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
273 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
274 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
275 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
276 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
277 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
278 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
279 "resolves_simple_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
280 "use_local": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
281 "versionless": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
282 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
283 "dependency_type": "conda",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
284 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
285 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
286 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
287 "name": "pandas",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
288 "version": "2.2.3"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
289 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
290 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
291 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
292 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
293 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
294 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
295 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
296 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
297 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
298 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
299 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
300 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
301 "resolves_simple_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
302 "use_local": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
303 "versionless": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
304 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
305 "dependency_type": "conda",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
306 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
307 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
308 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
309 "name": "dnacauldron",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
310 "version": "2.0.12"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
311 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
312 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
313 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
314 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
315 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
316 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
317 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
318 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
319 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
320 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
321 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
322 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
323 "resolves_simple_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
324 "use_local": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
325 "versionless": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
326 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
327 "dependency_type": "conda",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
328 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
329 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
330 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
331 "name": "pdf-reports",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
332 "version": "0.3.9"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
333 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
334 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
335 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
336 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
337 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
338 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
339 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
340 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
341 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
342 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
343 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
344 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
345 "resolves_simple_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
346 "use_local": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
347 "versionless": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
348 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
349 "dependency_type": "conda",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
350 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
351 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
352 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
353 "name": "sequenticon",
1
bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
354 "version": "0.1.8"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
355 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
356 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
357 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
358 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
359 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
360 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
361 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
362 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
363 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
364 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
365 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
366 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
367 "resolves_simple_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
368 "use_local": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
369 "versionless": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
370 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
371 "dependency_type": "conda",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
372 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
373 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
374 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
375 "name": "dna_features_viewer",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
376 "version": "3.1.5"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
377 }
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
378 ],
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
379 "exit_code": 0,
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
380 "external_id": "60268",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
381 "galaxy_version": "24.2",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
382 "handler": null,
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
383 "history_id": "62972d51292f48e6",
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
384 "id": "e08d37863731003c",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
385 "inputs": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
386 "domestication_csv": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
387 "id": "0ac23d4d0b88827c",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
388 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
389 "uuid": "89c41e63-3985-4c33-9154-735d98f3f2bb"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
390 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
391 "genbank_files1": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
392 "id": "55d915b26d3a354e",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
393 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
394 "uuid": "37a61c0f-4043-404f-97c9-1b2e4b277a0b"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
395 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
396 "genbank_files2": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
397 "id": "e08d37863731003c",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
398 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
399 "uuid": "acd5b8cd-260a-4eed-bbaa-083097afd437"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
400 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
401 "genbank_files3": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
402 "id": "72fd2001a1c00c74",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
403 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
404 "uuid": "b429cf4a-5fc0-4b2f-a27f-7b7d2da197dd"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
405 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
406 "genbank_files4": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
407 "id": "535975adfebcbd66",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
408 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
409 "uuid": "643037ae-a752-4ce5-80e9-921fa8b24d3b"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
410 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
411 "genbank_files5": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
412 "id": "44c226435b38bb38",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
413 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
414 "uuid": "dce00e9a-8b99-4bce-a1c2-b17377db99cf"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
415 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
416 "genbank_files6": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
417 "id": "bbe178e57c4f8c81",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
418 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
419 "uuid": "020c2948-6eb0-4860-b17b-a3f35d138965"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
420 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
421 "genbank_files7": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
422 "id": "11bdfc4549627602",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
423 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
424 "uuid": "2c6f9cf6-bf93-4c97-9ea8-17ad34702969"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
425 }
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
426 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
427 "job_messages": [],
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
428 "job_metrics": [],
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
429 "job_runner_name": null,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
430 "job_stderr": "",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
431 "job_stdout": "",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
432 "model_class": "Job",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
433 "output_collections": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
434 "methprot_gb": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
435 "id": "9106613ee8ff8561",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
436 "src": "hdca"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
437 }
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
438 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
439 "outputs": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
440 "__new_primary_file_methprot_gb|p14_CMVp__": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
441 "id": "63657e65b797e156",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
442 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
443 "uuid": "ff3d4f80-e86b-4391-b395-1f11f74883e0"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
444 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
445 "__new_primary_file_methprot_gb|p16_bGHpolyA__": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
446 "id": "7000d26bf45ffb00",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
447 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
448 "uuid": "0ea8ad54-9cee-4a88-9352-cbf201923fb8"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
449 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
450 "__new_primary_file_methprot_gb|p18_CMVp__": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
451 "id": "36313fb553e6e307",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
452 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
453 "uuid": "e6a1e8a2-1881-4ea9-9e2f-c2bc40a273a6"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
454 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
455 "__new_primary_file_methprot_gb|p19_mNeoGreen__": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
456 "id": "12401c2b6811fee0",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
457 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
458 "uuid": "a73b7443-df14-4dea-84f3-381db57cca18"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
459 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
460 "__new_primary_file_methprot_gb|p22_PGKpolyA__": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
461 "id": "0eb41dc2e09a8361",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
462 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
463 "uuid": "67791634-ccbb-4984-82b6-5f6dabf17fd3"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
464 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
465 "__new_primary_file_methprot_gb|p3_2_CAG__": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
466 "id": "963b9ee6a9b85043",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
467 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
468 "uuid": "a79b48fa-4414-4de6-9747-be228b0650ff"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
469 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
470 "__new_primary_file_methprot_gb|p7_gfp_sequence__": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
471 "id": "3716318b258c039e",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
472 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
473 "uuid": "3834e7e4-4365-4020-88d7-554281f0836f"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
474 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
475 "output_zip": {
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
476 "id": "c2e357d169213b81",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
477 "src": "hda",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
478 "uuid": "257e63c3-87b5-459a-b118-921e6217abe8"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
479 }
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
480 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
481 "params": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
482 "__input_ext": "\"input\"",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
483 "adv": "{\"allow_edits\": true, \"use_file_names_as_ids\": true}",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
484 "chromInfo": "\"/tmp/tmpa__rr6q2/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
485 "dbkey": "\"?\"",
4
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 1
diff changeset
486 "genbank_files": "{\"values\": [{\"id\": 3, \"src\": \"hdca\"}]}",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
487 "methylation_protection": "true"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
488 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
489 "state": "ok",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
490 "stderr": "\rrecord: 0%| | 0/7 [00:00<?, ?it/s, now=None]\rrecord: 43%|\u2588\u2588\u2588\u2588\u258e | 3/7 [00:01<00:02, 1.73it/s, now=None]\r \r",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
491 "stdout": "Part names were not truncated\n",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
492 "tool_id": "domestication",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
493 "tool_stderr": "\rrecord: 0%| | 0/7 [00:00<?, ?it/s, now=None]\rrecord: 43%|\u2588\u2588\u2588\u2588\u258e | 3/7 [00:01<00:02, 1.73it/s, now=None]\r \r",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
494 "tool_stdout": "Part names were not truncated\n",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
495 "update_time": "2025-05-23T09:03:33.301866",
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
496 "user_email": "planemo@galaxyproject.org",
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
497 "user_id": "2d588720727ac897"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
498 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
499 "status": "success",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
500 "test_index": 1,
8
4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 7
diff changeset
501 "time_seconds": 34.21326494216919,
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
502 "tool_id": "domestication",
1
bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents: 0
diff changeset
503 "tool_version": "0.1.0+galaxy1"
0
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
504 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
505 "has_data": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
506 "id": "domestication-1"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
507 }
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
508 ],
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
509 "version": "0.1"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae
tduigou
parents:
diff changeset
510 }