Mercurial > repos > pimarin > data_manager_fetch_plasmidfinder

annotate plasmidfinder-db/RepL.fsa @ 3:5ffc68b4ec04 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
author pimarin
date Fri, 17 Feb 2023 14:03:19 +0000
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3
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
pimarin
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diff changeset
1 >rep12_1_CDS32(pBMB67)_DQ363750
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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2 atggaacaagttaaacatattttagagcctataacagagtacacatcgcttgatgtaatgcgttttatggttcatggtgcattatatgaaaaatcacctaaaaattggacaatggatgatagaaagagagaaatgcaacgtgaaagattaagagaggttggagttgttcatgtaactactggaaaagagcaactttctacgggacaaagtattgtggtaagtagctttgagacattagaacgcttaaacaatcatttgacacactggacaccacaagtctatatgtggggaaaggctaataatgaagggcgtaattttgaaaacattcgtttcattacatgtgttggagtagaaatagataaaaaaattagtcttgaagaaattcattatgcagcagcagtaaataacttgccatccccaagtgttattctttcaacaccacgaggattgcaatggttttatgtattctctacaccatttttgacagaaaaaggccgtaaggcaggtcgttttgtttctgaagaaattaaaagagcctttgtaaatgtcatggatgctagtgaagtagaagaaggaactacaaagcctatatttgaattagaagcggatcttggggcttattcgctagggtattttagaattccacgagaagataatgtcctttactttaatggacaagcattgaactcagaatgggctttagcatgggctaaagaacaatctaggaagcataaaagaccagcggttgctaatacttcttcaagtagaatgtataaaaaggttggcatcatggaagatccagcaattcaaagtattatcaataacgtatttttacgtggctgtaaaggcaagctaggccgtaataatgctgtatttattttatctttagctatgaaatatgaaggtaaaacagaaagtgaaatcattgacaaaatagatgaatggaattctcaaataaaatcaccattaaagcatactgagattttacgtactgttagaagtgccatgaatgataaatataatgcgcctaaaaaggattatgtagaagaactggctgaaatgagaatggaatttgtctttgatatccgtacaccagcaaaggaacgcttagaccgtcagcaaagccattattcagaatgggagcaagatattatagagatggtagagcagcaatgcacgtctgatgcaccttatttatgcggctctctacgtgctttagcgcaaaaaattggtgaagagtcaccagtaggtaaagcaatgaataaatctagcttatccgatgtattaaaggtttctaaaaaattaattgtaaagactaatggaaaaaagggcagaaatgctcgtacatatattacaacaagaagtgtattactgaaatccaataaacataactttaaagcctttttattagggaaattagcattcaatgaagagatcgagagcactacacttgaagtacaatttcgaggccaaacaagcgaacctgaagcaaataaaaatagtagaaataaacgctctgggccagggggataa
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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3 >rep12_2_CDS1(plasmid)_AY278324
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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4 atggaacaagttaaacatattttagagcctataacagagtacacatcgcttgatgtaatgcgttttatggttcatggtgcattatatgaaaaatcacctaaaaattggacaatggatgatagaaagagagaaatgcaacgtgaaagattaagagaggttggagttgttcatgtaactactggaaaagagcaactttctacgggacaaagtattgtggtaagtagctttgagacattagaacgcttaaacaatcatttgacacactggacaccacaagtctatatgtggggaaaggctaataatgaagggcgtaattttgaaaacattcgtttcattacatgtgttggagtagaaatagataaaaaaattagtcttgaagaaattcattatgcagcagcagtaaataacttgccatccccaagtgttattctttcaacaccacgaggattgcaatggttttatgtattctctacaccatttttgacagaaaaaggccgtaaggcaggtcgttttgtttctgaagaaattaaaagagcctttgtaaatgtcatggatgctagtgaagtagaagaaggaactacaaagcctatatttgaattagaagcggatcttggggcttattcgctagggtattttagaattccacgagaagataatgtcctttactttaatggacaagcattgaactcagaatgggctttagcatgggctaaagaacaatctaggaagcataaaagaccagcggttgctaatacttcttcaagtagaatgtataaaaaggttggcatcatggaagatccagcaattcaaagtattatcaataacgtatttttacgtggctgtaaaggcaagctaggccgtaataatgctgtatttattttatctttagctatgaaatatgaaggtaaaacagaaagtgaaatcattgacaaaatagatgaatggaattctcaaataaaatcaccattaaagcatactgagattttacgtactgttagaagtgccatgaatgataaatataatgcgcctaaaaaggattatgtagaagaactggctgaaatgagaatggaatttgtctttgatatccgtacaccagcaaaggaacgcttagaccgtcagcaaagccattattcagaatgggagcaagatattatagagatggtagagcagcaatgcacgtctgatgcaccttatttatgcggctctctacgtgctttagcgcaaaaaattggtgaagagtcaccagtaggtaaagcaatgaataaatctagcttatccgatgtattaaaggtttctaaaaaattaattgtaaagactaatggaaaaaagggcagaaatgctcgtacatatattacaacaagaagtgtattactgaaatccaataaacataactttaaagcctttttattagggaaattagcattcaatgaagagatcgagagcactacacttgaagtacaatttcgaggccaaacaagcgaacctgaagcaaataaaaatagttga
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
pimarin
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5 >repUS45_1_rep(pKKS966)_FN677368
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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6 ATGGCAGAATTACATGTACAAGATAAGATAGACCCTAAAAACCCTAATTCAATCAGTTTTGAAGCTAGAAAGAGACAATTAGAGGAAGATGAAAGACGAGAGAAAGAAGAACTTCAAAGACAAAAGAAAAGCCCTTACAGGAGTTGGGTACAAATGAATAAAGACGCTTATTCGGCAGAAGATTGGTTAATGTCAAAATCGCCAATTGCATATAGAATCTTTAAATTCTTAATAAACAACATGGATTCATACAATGCTGTTATGTGTTCTCAACCCGTATTACAAGAGCAATTTGACGTTAGTCGAGTAACTATATCAAGAGCAATAAAATTACTTAAAGAAAAACAATTCATTGATGTTTACAAATCAGGAACATCAAACGTTTACGCAGTTAATAAACAAATCGCTTGGAGTAGTTGGGGAAGTAACTTTAAACATGGAAAATTTGGTGCTAACATCATTCTTTCTGAAAGTGAACAAGATGAACAAGTAAAACTTGAAATCCAAAACATAAAGAGGTATCTCTTAAAGATTGCTAGAAAAACAGGTGCTATAATGATTCATTCAAATTTAGTTCATCGTGGAAACCATAGTAAAGAAAAATATTTACTTGCACGATTTCAAGAATGGGGTAAAGATGATGAGGGACTTGATATATAA
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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7 >rep10b_1_rep(pUR2355)_JQ312422
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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8 ATGAAAGAACGATATGGAACGGTATATAAAGGGAAAGAAGAGTTTATAAATAAAGACTCAGGAGAAGTAATACAGTTTGATAAGCTATATAGAGCACAAACAGGTGGAAACTTCGTAAAGATGTATATGGAAATGTTTGGACAAATGTTGGGCTTAATGAATAAAAGAGGAGAAGTAATGCAGTATCTTTTTAAAGACTTAAACCTATCAAGCAATACAGTAATAAAAACAGTTCGAGAACTCGCTAAAGAAACAAATACAAGTACAAAAACTGTAACAGAAACCCTTAAAATTATGGAAAAAGGAAACATTATAAAAAGAAAGACTGGAGTTATAATGATAAACCCAGCCTTATTAATGCGTGGAGATGATAATAAAAAACGTTATCTCTTACTAGAATTCGAGCAATTCAATAGAGAAAACGAATTAGAACACGCTTTAAATGAATATGAAAGTTTTAAGTAA
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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9 >rep10b_3_rep(pSK3)_SAU96609
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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10 ATGAAAGAACGCTATGGAACGGTATATAAAGGGAAAGAAGAATTCATAAATAAAGACTCAGGAGAAGTAATACAGTTTGATAAGCTATACAGAGCACAAACAGGTGGAAACTTCGTAAAGATGTACATGGAACTGTTTGGACAAATGTTGGGATTAATGAATAAAAGAGGGGAAGTAATGCAGTACCTTTTTAAAGACTTAAATCTATCAAGCAATACAGTAATAAAAACAGTTCGAGAACTTGCTAAAGAAACAAATACAAGTACAAAAACAGTAACAGAAACCCTTAAAATTATGGAAAAAGGAAACATTATAAAAAGAAAGACTGGAGTTATAATGATAAACCCAGCCTTATTAATGCGTGGAGATGATAGTAAAAAACGTTATCTCTTACTAGAATTTGAACAGTTCGATAGAGAAAACGAATTAGAACACGCTTTAAATGAATATGAAAGTTTTAAGTAA
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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11 >rep10b_2_rep(pSK6)_U96610
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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12 ATGAAAGAACGCTATGGAACAGTATATAAAGGGAAAGAAGAGTTTGTAAATAAAGACTCAGGAGAAGTAATACAGTTTGATAAGCTATATAGAGCACAAACAGGTGGAAACTTCGTGAAGATGTATATGGAACTGTTTGGAGAAATGTTGGGATTAATGAATAAAAGAGGAGAAGTAATGCAGTACCTTTTTAAAGACTTAAACCTATCAAGTAATACAGTAATAAAAACAGTTCGAGAACTTGCTAAAGAAACAAATACAAGTACAAAAACCGTAACAGAAACCCTTAAAATTATGGAAAAAGGAAACATTATAAAAAGAAAGACTGGAGTTATAATGATAAACCCAGCCTTATTAATGCGTGGAGATGATAGCAAAAAACGTTATCTCTTACTAGAATTTGAGCAATTCGATAGAGAAAACGAATTAGAACACGCTTTAAATGAATATGAAAGTTTTAAGTAA
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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13 >rep10_6_rep(SAP093B)_GQ900442
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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14 ATGAAAGAAAGATATGGAACAGTATATAAAGGCTCTCAGAGGCTCATAGACGAGGAAAGTGGAGAAGTAATAGAGGTAGATAAGCTATACCGTAAACAAACGTCTGGTAACTTTGTAAAAGCGTATATCGTCCAATTAATAAGTATGTTAGATATGATAGGCGGTAAAAAGCTCAAGATTGTTAATTATATATTAGATAATGTACATCTAAGTAATAACACAATGATAGCAACTGTTAGAGAAATAGCAGAAGGAACAAATACAAGCACGAAAACCGTAAATACAACGCTTAAAATCTTAGAAGAAGGAAATATCATTAAAAGAAGAACTGGAGCATTAATGCTAAACCCAGAGCTACTCATGAGAGGCGATGACCAAAAACAAAAATACCTCTTACTCGAATTTGGGAACTTTGAGCAAGAGGACGACCAAAAGCAAGAAAATGCTTTATCAGAATATTATTCTTTCAAGGAGTAG
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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15 >rep10_2_CDS1(pIM13)_M13761
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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16 Atgaaagaaagatatggaacagtctataaaggctctcagaggctcatagacgaagaaagtggagaagtcatagaggtagacaagttataccgtaaacaaacgtctggtaacttcgtaaaggcatatatagtgcaattaataagtatgttagatatgattggcggaaaaaaacttaaaatcgttaactatatcctagataatgtccacttaagtaacaatacaatgatagctacaacaagagaaatagcaaaagctacaggaacaagtctacaaacagtaataacaacacttaaaatcttagaagaaggaaatattataaaaagaaaaactggagtattaatgttaaaccctgaactactaatgagaggcgacgaccaaaaacaaaaatacctcttactcgaatttgggaactttgagcaagaggcaaatgaaatagattga
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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17 >rep10_3_pNE131p1(pNE131)_NC001390
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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18 ATGAAAGAAAGATATGGAACAGTCTATAAAGGCTCTCAGAGGCTCATAGACGAAGAAAGTGGAGAAGTCATAGAGGTAGACAAGTTATACCGTAAACAAACGTCTGGTAACTTCGTAAAGGCATATATAGTGCAATTAATAAGTATGTTAGATATGATTGGCGGAAAAAAACTTAAAATCGTTAACTATATCCTAGATAATGTCCACTTAAGTAACAATACAATGATAGCTACAACAAGAGAAATAGCAAAAGCTACAGGAACAAGTCTACAAACAGTAATAACAACACTTAAAATCTTAGAAGAAGGAAATATTATAAAAAGAAAAACTGGAGTATTAATGTTAAACCCTGAACTACTAATGAGAGGCGACGACCAAAAACAAAAATACCTCTTACTCGAATTTGGGAACTTTGAGCAAGAGGCAAATGAAAAACAAGAAAATGCACTTTATCTGATTATTATTCTTTCAAGGACTAGTATAACATAA
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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19 >rep10_5_repL(pWBG738)_DQ088624
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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20 ATGAAAGAAAGATATGGAACAGTCTATAAAGGCTCTCAGAGGCTCATAGACGAAGAAAGTGGAGAAGTCATAGAGGTAGACAAGTTATACCGTAAACAAACGTCTGGTAACTTCGTAAAGGCATATATAGTGCAATTAATAAGTATGTTAGATATGATTGGCGGAAAAAAACTTAAAATCGTCAACTATATCCTAGATAATGTCCACTTAAGTAACAATACAATGATAGCTACAACAAGAGAAATAGCAAAAGCTACAGGAACAAGTCTACAAACAGTAATAACAACACTTAAAATCTTAGAAGAAGGAAATATTATAAAAAGAAAAACTGGAGTATTAATGTTAAACCCTGAACTACTAATGAGAGGCGACGACCAAAAACAAAAATACCTCTTACTCGAATTTGGGAACTTTGAGCAAGAGGCAAATGAAAAACAAGAAAATGCATTATCTGATTATTATTCTTTCAAGGACTAG
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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21 >rep10_4_repL(pDLK1)_GU562624
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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22 ATGAAAGAAAGATATGGAACAGTCTATAAAGGCTCTCAGAGGCTCATAGACGAAGAAAGTGGAGAAGTCATAGAGGTAGACAAGTTATACCGTAAACAAACGTCTGGTAACTTCGTAAAGGCATATATAGTGCAATTAATAAGTATGTTAGATATGATTGGCGGAAAAAAACTTAAAATCGTTAACTATATCCTAGATAATGTCCACTTAAGTAACAATACAATGATAGCTACAACAAGAGAAATAGCAAAAGCTACAGGAACAAGTCTACAAACAGTAATAACAACACTTAAAATCTTAGAAGAAGGAAATATTATAAAAAGAAAAACTGGAGTATTAATGTTAAACCCTGAACTACTAATGAGAGGCGACGACCAAAAACAAAAATACCTCTTACTCGAATTTGGGAACTTTGAGCAAGAGGCAAATGAAAAACAAGAAAATGCATTATCTGATTATTATTCTTTCAAGGACTAG