Mercurial > repos > pimarin > data_manager_fetch_plasmidfinder

comparison plasmidfinder-db/RepL.fsa @ 3:5ffc68b4ec04 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
author pimarin
date Fri, 17 Feb 2023 14:03:19 +0000
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2:bd56ac4cca16 3:5ffc68b4ec04
1 >rep12_1_CDS32(pBMB67)_DQ363750
2 atggaacaagttaaacatattttagagcctataacagagtacacatcgcttgatgtaatgcgttttatggttcatggtgcattatatgaaaaatcacctaaaaattggacaatggatgatagaaagagagaaatgcaacgtgaaagattaagagaggttggagttgttcatgtaactactggaaaagagcaactttctacgggacaaagtattgtggtaagtagctttgagacattagaacgcttaaacaatcatttgacacactggacaccacaagtctatatgtggggaaaggctaataatgaagggcgtaattttgaaaacattcgtttcattacatgtgttggagtagaaatagataaaaaaattagtcttgaagaaattcattatgcagcagcagtaaataacttgccatccccaagtgttattctttcaacaccacgaggattgcaatggttttatgtattctctacaccatttttgacagaaaaaggccgtaaggcaggtcgttttgtttctgaagaaattaaaagagcctttgtaaatgtcatggatgctagtgaagtagaagaaggaactacaaagcctatatttgaattagaagcggatcttggggcttattcgctagggtattttagaattccacgagaagataatgtcctttactttaatggacaagcattgaactcagaatgggctttagcatgggctaaagaacaatctaggaagcataaaagaccagcggttgctaatacttcttcaagtagaatgtataaaaaggttggcatcatggaagatccagcaattcaaagtattatcaataacgtatttttacgtggctgtaaaggcaagctaggccgtaataatgctgtatttattttatctttagctatgaaatatgaaggtaaaacagaaagtgaaatcattgacaaaatagatgaatggaattctcaaataaaatcaccattaaagcatactgagattttacgtactgttagaagtgccatgaatgataaatataatgcgcctaaaaaggattatgtagaagaactggctgaaatgagaatggaatttgtctttgatatccgtacaccagcaaaggaacgcttagaccgtcagcaaagccattattcagaatgggagcaagatattatagagatggtagagcagcaatgcacgtctgatgcaccttatttatgcggctctctacgtgctttagcgcaaaaaattggtgaagagtcaccagtaggtaaagcaatgaataaatctagcttatccgatgtattaaaggtttctaaaaaattaattgtaaagactaatggaaaaaagggcagaaatgctcgtacatatattacaacaagaagtgtattactgaaatccaataaacataactttaaagcctttttattagggaaattagcattcaatgaagagatcgagagcactacacttgaagtacaatttcgaggccaaacaagcgaacctgaagcaaataaaaatagtagaaataaacgctctgggccagggggataa
3 >rep12_2_CDS1(plasmid)_AY278324
4 atggaacaagttaaacatattttagagcctataacagagtacacatcgcttgatgtaatgcgttttatggttcatggtgcattatatgaaaaatcacctaaaaattggacaatggatgatagaaagagagaaatgcaacgtgaaagattaagagaggttggagttgttcatgtaactactggaaaagagcaactttctacgggacaaagtattgtggtaagtagctttgagacattagaacgcttaaacaatcatttgacacactggacaccacaagtctatatgtggggaaaggctaataatgaagggcgtaattttgaaaacattcgtttcattacatgtgttggagtagaaatagataaaaaaattagtcttgaagaaattcattatgcagcagcagtaaataacttgccatccccaagtgttattctttcaacaccacgaggattgcaatggttttatgtattctctacaccatttttgacagaaaaaggccgtaaggcaggtcgttttgtttctgaagaaattaaaagagcctttgtaaatgtcatggatgctagtgaagtagaagaaggaactacaaagcctatatttgaattagaagcggatcttggggcttattcgctagggtattttagaattccacgagaagataatgtcctttactttaatggacaagcattgaactcagaatgggctttagcatgggctaaagaacaatctaggaagcataaaagaccagcggttgctaatacttcttcaagtagaatgtataaaaaggttggcatcatggaagatccagcaattcaaagtattatcaataacgtatttttacgtggctgtaaaggcaagctaggccgtaataatgctgtatttattttatctttagctatgaaatatgaaggtaaaacagaaagtgaaatcattgacaaaatagatgaatggaattctcaaataaaatcaccattaaagcatactgagattttacgtactgttagaagtgccatgaatgataaatataatgcgcctaaaaaggattatgtagaagaactggctgaaatgagaatggaatttgtctttgatatccgtacaccagcaaaggaacgcttagaccgtcagcaaagccattattcagaatgggagcaagatattatagagatggtagagcagcaatgcacgtctgatgcaccttatttatgcggctctctacgtgctttagcgcaaaaaattggtgaagagtcaccagtaggtaaagcaatgaataaatctagcttatccgatgtattaaaggtttctaaaaaattaattgtaaagactaatggaaaaaagggcagaaatgctcgtacatatattacaacaagaagtgtattactgaaatccaataaacataactttaaagcctttttattagggaaattagcattcaatgaagagatcgagagcactacacttgaagtacaatttcgaggccaaacaagcgaacctgaagcaaataaaaatagttga
5 >repUS45_1_rep(pKKS966)_FN677368
6 ATGGCAGAATTACATGTACAAGATAAGATAGACCCTAAAAACCCTAATTCAATCAGTTTTGAAGCTAGAAAGAGACAATTAGAGGAAGATGAAAGACGAGAGAAAGAAGAACTTCAAAGACAAAAGAAAAGCCCTTACAGGAGTTGGGTACAAATGAATAAAGACGCTTATTCGGCAGAAGATTGGTTAATGTCAAAATCGCCAATTGCATATAGAATCTTTAAATTCTTAATAAACAACATGGATTCATACAATGCTGTTATGTGTTCTCAACCCGTATTACAAGAGCAATTTGACGTTAGTCGAGTAACTATATCAAGAGCAATAAAATTACTTAAAGAAAAACAATTCATTGATGTTTACAAATCAGGAACATCAAACGTTTACGCAGTTAATAAACAAATCGCTTGGAGTAGTTGGGGAAGTAACTTTAAACATGGAAAATTTGGTGCTAACATCATTCTTTCTGAAAGTGAACAAGATGAACAAGTAAAACTTGAAATCCAAAACATAAAGAGGTATCTCTTAAAGATTGCTAGAAAAACAGGTGCTATAATGATTCATTCAAATTTAGTTCATCGTGGAAACCATAGTAAAGAAAAATATTTACTTGCACGATTTCAAGAATGGGGTAAAGATGATGAGGGACTTGATATATAA
7 >rep10b_1_rep(pUR2355)_JQ312422
8 ATGAAAGAACGATATGGAACGGTATATAAAGGGAAAGAAGAGTTTATAAATAAAGACTCAGGAGAAGTAATACAGTTTGATAAGCTATATAGAGCACAAACAGGTGGAAACTTCGTAAAGATGTATATGGAAATGTTTGGACAAATGTTGGGCTTAATGAATAAAAGAGGAGAAGTAATGCAGTATCTTTTTAAAGACTTAAACCTATCAAGCAATACAGTAATAAAAACAGTTCGAGAACTCGCTAAAGAAACAAATACAAGTACAAAAACTGTAACAGAAACCCTTAAAATTATGGAAAAAGGAAACATTATAAAAAGAAAGACTGGAGTTATAATGATAAACCCAGCCTTATTAATGCGTGGAGATGATAATAAAAAACGTTATCTCTTACTAGAATTCGAGCAATTCAATAGAGAAAACGAATTAGAACACGCTTTAAATGAATATGAAAGTTTTAAGTAA
9 >rep10b_3_rep(pSK3)_SAU96609
10 ATGAAAGAACGCTATGGAACGGTATATAAAGGGAAAGAAGAATTCATAAATAAAGACTCAGGAGAAGTAATACAGTTTGATAAGCTATACAGAGCACAAACAGGTGGAAACTTCGTAAAGATGTACATGGAACTGTTTGGACAAATGTTGGGATTAATGAATAAAAGAGGGGAAGTAATGCAGTACCTTTTTAAAGACTTAAATCTATCAAGCAATACAGTAATAAAAACAGTTCGAGAACTTGCTAAAGAAACAAATACAAGTACAAAAACAGTAACAGAAACCCTTAAAATTATGGAAAAAGGAAACATTATAAAAAGAAAGACTGGAGTTATAATGATAAACCCAGCCTTATTAATGCGTGGAGATGATAGTAAAAAACGTTATCTCTTACTAGAATTTGAACAGTTCGATAGAGAAAACGAATTAGAACACGCTTTAAATGAATATGAAAGTTTTAAGTAA
11 >rep10b_2_rep(pSK6)_U96610
12 ATGAAAGAACGCTATGGAACAGTATATAAAGGGAAAGAAGAGTTTGTAAATAAAGACTCAGGAGAAGTAATACAGTTTGATAAGCTATATAGAGCACAAACAGGTGGAAACTTCGTGAAGATGTATATGGAACTGTTTGGAGAAATGTTGGGATTAATGAATAAAAGAGGAGAAGTAATGCAGTACCTTTTTAAAGACTTAAACCTATCAAGTAATACAGTAATAAAAACAGTTCGAGAACTTGCTAAAGAAACAAATACAAGTACAAAAACCGTAACAGAAACCCTTAAAATTATGGAAAAAGGAAACATTATAAAAAGAAAGACTGGAGTTATAATGATAAACCCAGCCTTATTAATGCGTGGAGATGATAGCAAAAAACGTTATCTCTTACTAGAATTTGAGCAATTCGATAGAGAAAACGAATTAGAACACGCTTTAAATGAATATGAAAGTTTTAAGTAA
13 >rep10_6_rep(SAP093B)_GQ900442
14 ATGAAAGAAAGATATGGAACAGTATATAAAGGCTCTCAGAGGCTCATAGACGAGGAAAGTGGAGAAGTAATAGAGGTAGATAAGCTATACCGTAAACAAACGTCTGGTAACTTTGTAAAAGCGTATATCGTCCAATTAATAAGTATGTTAGATATGATAGGCGGTAAAAAGCTCAAGATTGTTAATTATATATTAGATAATGTACATCTAAGTAATAACACAATGATAGCAACTGTTAGAGAAATAGCAGAAGGAACAAATACAAGCACGAAAACCGTAAATACAACGCTTAAAATCTTAGAAGAAGGAAATATCATTAAAAGAAGAACTGGAGCATTAATGCTAAACCCAGAGCTACTCATGAGAGGCGATGACCAAAAACAAAAATACCTCTTACTCGAATTTGGGAACTTTGAGCAAGAGGACGACCAAAAGCAAGAAAATGCTTTATCAGAATATTATTCTTTCAAGGAGTAG
15 >rep10_2_CDS1(pIM13)_M13761
16 Atgaaagaaagatatggaacagtctataaaggctctcagaggctcatagacgaagaaagtggagaagtcatagaggtagacaagttataccgtaaacaaacgtctggtaacttcgtaaaggcatatatagtgcaattaataagtatgttagatatgattggcggaaaaaaacttaaaatcgttaactatatcctagataatgtccacttaagtaacaatacaatgatagctacaacaagagaaatagcaaaagctacaggaacaagtctacaaacagtaataacaacacttaaaatcttagaagaaggaaatattataaaaagaaaaactggagtattaatgttaaaccctgaactactaatgagaggcgacgaccaaaaacaaaaatacctcttactcgaatttgggaactttgagcaagaggcaaatgaaatagattga
17 >rep10_3_pNE131p1(pNE131)_NC001390
18 ATGAAAGAAAGATATGGAACAGTCTATAAAGGCTCTCAGAGGCTCATAGACGAAGAAAGTGGAGAAGTCATAGAGGTAGACAAGTTATACCGTAAACAAACGTCTGGTAACTTCGTAAAGGCATATATAGTGCAATTAATAAGTATGTTAGATATGATTGGCGGAAAAAAACTTAAAATCGTTAACTATATCCTAGATAATGTCCACTTAAGTAACAATACAATGATAGCTACAACAAGAGAAATAGCAAAAGCTACAGGAACAAGTCTACAAACAGTAATAACAACACTTAAAATCTTAGAAGAAGGAAATATTATAAAAAGAAAAACTGGAGTATTAATGTTAAACCCTGAACTACTAATGAGAGGCGACGACCAAAAACAAAAATACCTCTTACTCGAATTTGGGAACTTTGAGCAAGAGGCAAATGAAAAACAAGAAAATGCACTTTATCTGATTATTATTCTTTCAAGGACTAGTATAACATAA
19 >rep10_5_repL(pWBG738)_DQ088624
20 ATGAAAGAAAGATATGGAACAGTCTATAAAGGCTCTCAGAGGCTCATAGACGAAGAAAGTGGAGAAGTCATAGAGGTAGACAAGTTATACCGTAAACAAACGTCTGGTAACTTCGTAAAGGCATATATAGTGCAATTAATAAGTATGTTAGATATGATTGGCGGAAAAAAACTTAAAATCGTCAACTATATCCTAGATAATGTCCACTTAAGTAACAATACAATGATAGCTACAACAAGAGAAATAGCAAAAGCTACAGGAACAAGTCTACAAACAGTAATAACAACACTTAAAATCTTAGAAGAAGGAAATATTATAAAAAGAAAAACTGGAGTATTAATGTTAAACCCTGAACTACTAATGAGAGGCGACGACCAAAAACAAAAATACCTCTTACTCGAATTTGGGAACTTTGAGCAAGAGGCAAATGAAAAACAAGAAAATGCATTATCTGATTATTATTCTTTCAAGGACTAG
21 >rep10_4_repL(pDLK1)_GU562624
22 ATGAAAGAAAGATATGGAACAGTCTATAAAGGCTCTCAGAGGCTCATAGACGAAGAAAGTGGAGAAGTCATAGAGGTAGACAAGTTATACCGTAAACAAACGTCTGGTAACTTCGTAAAGGCATATATAGTGCAATTAATAAGTATGTTAGATATGATTGGCGGAAAAAAACTTAAAATCGTTAACTATATCCTAGATAATGTCCACTTAAGTAACAATACAATGATAGCTACAACAAGAGAAATAGCAAAAGCTACAGGAACAAGTCTACAAACAGTAATAACAACACTTAAAATCTTAGAAGAAGGAAATATTATAAAAAGAAAAACTGGAGTATTAATGTTAAACCCTGAACTACTAATGAGAGGCGACGACCAAAAACAAAAATACCTCTTACTCGAATTTGGGAACTTTGAGCAAGAGGCAAATGAAAAACAAGAAAATGCATTATCTGATTATTATTCTTTCAAGGACTAG