Mercurial > repos > iuc > package_python_2_7_qime_1_9_1

annotate tool_dependencies.xml @ 8:6690686484a2 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
author iuc
date Mon, 05 Oct 2015 18:12:25 -0400
parents cf2c3aec42be
children dc0c2d23b6b6
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46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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1 <?xml version="1.0"?>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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2 <tool_dependency>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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3 <package name="numpy" version="1.9">
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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4 <repository changeset_revision="8d42102c4e36" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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5 </package>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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6 <package name="python" version="2.7.10">
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7 <repository changeset_revision="08162f8bc496" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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8 </package>
3
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9 <package name="pandas" version="0.16">
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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10 <repository changeset_revision="2b6c63eac255" name="package_python_2_7_pandas_0_16" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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11 </package>
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12 <package name="matplotlib" version="1.4">
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13 <repository changeset_revision="7e97b496667d" name="package_python_2_7_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
df21b5fd0d04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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14 </package>
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15 <package name="scipy" version="0.14">
cf2c3aec42be planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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16 <repository changeset_revision="7002d3382856" name="package_python_2_7_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
cf2c3aec42be planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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17 </package>
0
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18 <package name="qime" version="1.9.1">
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19 <install version="1.0">
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20 <actions>
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21 <action type="setup_python_environment">
3
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22 <repository changeset_revision="08162f8bc496" name="package_python_2_7_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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23 <package name="python" version="2.7.10" />
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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24 </repository>
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25 <repository changeset_revision="8d42102c4e36" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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26 <package name="numpy" version="1.9" />
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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27 </repository>
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28 <repository changeset_revision="2b6c63eac255" name="package_python_2_7_pandas_0_16" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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29 <package name="pandas" version="0.16" />
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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30 </repository>
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df21b5fd0d04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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31 <repository changeset_revision="7e97b496667d" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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32 <package name="matplotlib" version="1.4" />
df21b5fd0d04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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33 </repository>
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34 <repository changeset_revision="7002d3382856" name="package_python_2_7_scipy_0_14" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
cf2c3aec42be planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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35 <package name="scipy" version="0.14" />
cf2c3aec42be planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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36 </repository>
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37 <!-- allow downloading and installing an Python package from https://pypi.org/ -->
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38
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6690686484a2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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55 <package md5sum="32d4db2b2c888dbbfc6aa33f02725526">https://pypi.python.org/packages/source/q/qiime/qiime-1.9.1.tar.gz</package>
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56 </action>
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58 <action type="set_environment">
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59 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
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60 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
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61 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
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62 <environment_variable action="set_to" name="PYTHONPATH_QIME">$INSTALL_DIR</environment_variable>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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63 <environment_variable action="set_to" name="QIME_ROOT_PATH">$INSTALL_DIR</environment_variable>
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64 </action>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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65 </actions>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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66 </install>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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67 <readme>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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68 QIIME: Quantitative Insights Into Microbial Ecology
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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69 http://www.qiime.org
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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70 </readme>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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71 </package>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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72 </tool_dependency>