Mercurial > repos > iuc > package_python_2_7_qime_1_9_1

annotate tool_dependencies.xml @ 3:6fc9b107c578 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
author iuc
date Mon, 05 Oct 2015 17:33:51 -0400
parents 4167f659f6b3
children 9d406104b605
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
1 <?xml version="1.0"?>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
2 <tool_dependency>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
3 <package name="numpy" version="1.9">
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
4 <repository changeset_revision="8d42102c4e36" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
5 </package>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
6 <package name="python" version="2.7.10">
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
7 <repository changeset_revision="08162f8bc496" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
8 </package>
3
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents: 2
diff changeset
9 <package name="pandas" version="0.16">
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents: 2
diff changeset
10 <repository changeset_revision="2b6c63eac255" name="package_python_2_7_pandas_0_16" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents: 2
diff changeset
11 </package>
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents: 2
diff changeset
12
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents: 2
diff changeset
13
0
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
14 <package name="qime" version="1.9.1">
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
15 <install version="1.0">
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
16 <actions>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
17 <action type="setup_python_environment">
3
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents: 2
diff changeset
18 <repository changeset_revision="08162f8bc496" name="package_python_2_7_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents: 2
diff changeset
19 <package name="python" version="2.7.10" />
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents: 2
diff changeset
20 </repository>
0
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
21 <repository changeset_revision="8d42102c4e36" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
22 <package name="numpy" version="1.9" />
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
23 </repository>
3
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents: 2
diff changeset
24 <repository changeset_revision="2b6c63eac255" name="package_python_2_7_pandas_0_16" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents: 2
diff changeset
25 <package name="pandas" version="0.16" />
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents: 2
diff changeset
26 </repository>
0
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
27 <!-- allow downloading and installing an Python package from https://pypi.org/ -->
2
4167f659f6b3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents: 1
diff changeset
28 <package md5sum="dd3a0669e1e6f09699eefa2c7fbd9756">https://pypi.python.org/packages/source/d/decorator/decorator-4.0.4.tar.gz</package>
1
8bda264029a7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents: 0
diff changeset
29 <package md5sum="4bdb684f40a2e1d9e42baae4dc211074">https://pypi.python.org/packages/source/s/scikit-bio/scikit-bio-0.4.0.tar.gz</package>
0
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
30 <package md5sum="32d4db2b2c888dbbfc6aa33f02725526">https://pypi.python.org/packages/source/q/qiime/qiime-1.9.1.tar.gz</package>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
31 </action>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
32
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
33 <action type="set_environment">
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
34 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
35 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
36 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
37 <environment_variable action="set_to" name="PYTHONPATH_QIME">$INSTALL_DIR</environment_variable>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
38 <environment_variable action="set_to" name="QIME_ROOT_PATH">$INSTALL_DIR</environment_variable>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
39 </action>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
40 </actions>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
41 </install>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
42 <readme>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
43 QIIME: Quantitative Insights Into Microbial Ecology
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
44 http://www.qiime.org
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
45 </readme>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
46 </package>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
iuc
parents:
diff changeset
47 </tool_dependency>