Mercurial > repos > iuc > package_python_2_7_qime_1_9_1

annotate tool_dependencies.xml @ 7:cf2c3aec42be draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
author iuc
date Mon, 05 Oct 2015 17:59:45 -0400
parents df21b5fd0d04
children 6690686484a2
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1 <?xml version="1.0"?>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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2 <tool_dependency>
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3 <package name="numpy" version="1.9">
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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4 <repository changeset_revision="8d42102c4e36" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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5 </package>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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6 <package name="python" version="2.7.10">
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7 <repository changeset_revision="08162f8bc496" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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8 </package>
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9 <package name="pandas" version="0.16">
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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10 <repository changeset_revision="2b6c63eac255" name="package_python_2_7_pandas_0_16" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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11 </package>
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12 <package name="matplotlib" version="1.4">
df21b5fd0d04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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13 <repository changeset_revision="7e97b496667d" name="package_python_2_7_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
df21b5fd0d04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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14 </package>
7
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15 <package name="scipy" version="0.14">
cf2c3aec42be planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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16 <repository changeset_revision="7002d3382856" name="package_python_2_7_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
cf2c3aec42be planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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17 </package>
0
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18 <package name="qime" version="1.9.1">
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19 <install version="1.0">
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20 <actions>
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21 <action type="setup_python_environment">
3
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22 <repository changeset_revision="08162f8bc496" name="package_python_2_7_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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23 <package name="python" version="2.7.10" />
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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24 </repository>
0
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25 <repository changeset_revision="8d42102c4e36" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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26 <package name="numpy" version="1.9" />
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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27 </repository>
3
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28 <repository changeset_revision="2b6c63eac255" name="package_python_2_7_pandas_0_16" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
6fc9b107c578 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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29 <package name="pandas" version="0.16" />
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30 </repository>
6
df21b5fd0d04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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31 <repository changeset_revision="7e97b496667d" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
df21b5fd0d04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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32 <package name="matplotlib" version="1.4" />
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33 </repository>
7
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34 <repository changeset_revision="7002d3382856" name="package_python_2_7_scipy_0_14" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
cf2c3aec42be planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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35 <package name="scipy" version="0.14" />
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36 </repository>
0
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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37 <!-- allow downloading and installing an Python package from https://pypi.org/ -->
4
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38
7
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39 <package md5sum="a68eb3c90b3b76714c5ceb8c09ea3a06">https://pypi.python.org/packages/source/f/future/future-0.15.2.tar.gz</package>
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40 <package md5sum="4d3ad0ff07b61373d2cefc89c5d0b20b">https://pypi.python.org/packages/source/n/nose/nose-1.3.7.tar.gz</package>
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41 <package md5sum="476881ef4012262dfc8adc645ee786c4">https://pypi.python.org/packages/source/s/six/six-1.9.0.tar.gz</package>
4
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42 <package md5sum="ff047a16dafeaa895bedef80a74c3728">https://pypi.python.org/packages/source/p/pytz/pytz-2015.6.tar.gz</package>
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43 <package md5sum="4ef68e1c485b09e9f034e10473e5add2">https://pypi.python.org/packages/source/p/python-dateutil/python-dateutil-2.4.2.tar.gz</package>
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44 <package md5sum="dd3a0669e1e6f09699eefa2c7fbd9756">https://pypi.python.org/packages/source/d/decorator/decorator-4.0.4.tar.gz</package>
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45 <package md5sum="4bdb684f40a2e1d9e42baae4dc211074">https://pypi.python.org/packages/source/s/scikit-bio/scikit-bio-0.4.0.tar.gz</package>
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46 <package md5sum="32d4db2b2c888dbbfc6aa33f02725526">https://pypi.python.org/packages/source/q/qiime/qiime-1.9.1.tar.gz</package>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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47 </action>
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48
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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49 <action type="set_environment">
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50 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
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51 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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52 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
46d4a44f8243 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_qime_1_9_1 commit f75ecd5f25f3754feeffacba92501c110737071b
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53 <environment_variable action="set_to" name="PYTHONPATH_QIME">$INSTALL_DIR</environment_variable>
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54 <environment_variable action="set_to" name="QIME_ROOT_PATH">$INSTALL_DIR</environment_variable>
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55 </action>
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56 </actions>
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57 </install>
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58 <readme>
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59 QIIME: Quantitative Insights Into Microbial Ecology
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60 http://www.qiime.org
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61 </readme>
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62 </package>
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63 </tool_dependency>