domestication: output.json annotate

annotate output.json @ 10:c52967fb95da draft default tip

planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae

author	tduigou
date	Tue, 27 May 2025 08:08:21 +0000
parents	4bfdec0be6b1
children

rev	line source
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	1 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	2 "summary": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	3 "num_errors": 0,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	4 "num_failures": 0,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	5 "num_skips": 0,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	6 "num_tests": 2
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	7 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	8 "tests": [
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	9 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	10 "data": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	11 "inputs": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	12 "adv\|allow_edits": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	13 "adv\|use_file_names_as_ids": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	14 "domestication_csv": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	15 "id": "df3910bf12e3ecf9",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	16 "src": "hda"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	17 },
1 bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 0 diff changeset	18 "genbank_files": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	19 "id": "40971d80b8a8a53c",
1 bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 0 diff changeset	20 "src": "hdca"
bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 0 diff changeset	21 },
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	22 "methylation_protection": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	23 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	24 "job": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	25 "command_line": "mkdir 'metoutdir_gb' && mkdir 'outdir_zip' && mkdir 'outdir_gb'&& cp '/tmp/tmpmo0pk3jj/files/6/1/a/dataset_61aea63f-fa8f-4855-b597-d298379d415c.dat' 'domestication_csv.csv' && python '/home/rkhaled/galaxytools/tools/domestication/domestication.py' --files_to_domestication '/tmp/tmpmo0pk3jj/files/2/f/f/dataset_2ff46bb9-5b06-4cad-b98f-afa1443697b5.dat,/tmp/tmpmo0pk3jj/files/9/9/c/dataset_99c508b5-234a-4eba-b9d2-05204eaa2ec8.dat,/tmp/tmpmo0pk3jj/files/0/a/0/dataset_0a0b7db9-a3ac-4999-b1c9-498618831d59.dat,/tmp/tmpmo0pk3jj/files/a/2/9/dataset_a2994595-0a40-48ba-a369-db577710e99a.dat,/tmp/tmpmo0pk3jj/files/c/8/b/dataset_c8b3e40f-a0a8-414e-a56c-bd71775b2218.dat,/tmp/tmpmo0pk3jj/files/c/8/1/dataset_c813a93e-97c6-4f6a-bcd0-dcdbd93728e2.dat,/tmp/tmpmo0pk3jj/files/3/6/8/dataset_368b2cf8-f34e-427d-888e-b431a4b28c87.dat' --csv_file 'domestication_csv.csv' --file_name_mapping '/tmp/tmpmo0pk3jj/files/2/f/f/dataset_2ff46bb9-5b06-4cad-b98f-afa1443697b5.dat:p3_2_CAG.gb,/tmp/tmpmo0pk3jj/files/9/9/c/dataset_99c508b5-234a-4eba-b9d2-05204eaa2ec8.dat:p7_gfp_sequence.gb,/tmp/tmpmo0pk3jj/files/0/a/0/dataset_0a0b7db9-a3ac-4999-b1c9-498618831d59.dat:p14_CMVp.gb,/tmp/tmpmo0pk3jj/files/a/2/9/dataset_a2994595-0a40-48ba-a369-db577710e99a.dat:p16_bGHpolyA.gb,/tmp/tmpmo0pk3jj/files/c/8/b/dataset_c8b3e40f-a0a8-414e-a56c-bd71775b2218.dat:p18_CMVp.gb,/tmp/tmpmo0pk3jj/files/c/8/1/dataset_c813a93e-97c6-4f6a-bcd0-dcdbd93728e2.dat:p19_mNeoGreen.gb,/tmp/tmpmo0pk3jj/files/3/6/8/dataset_368b2cf8-f34e-427d-888e-b431a4b28c87.dat:p22_PGKpolyA.gb' --use_file_names_as_id 'true' --allow_edits 'true' --output_dom 'output_zip.zip' --output_gb_dom 'outdir_gb' --output_methprot 'metoutdir_gb' --methylation_protection 'false' && cp 'output_zip.zip' '/tmp/tmpmo0pk3jj/job_working_directory/000/9/outputs/dataset_598cd11f-0878-422d-b265-3e7d109f52d4.dat'",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	26 "command_version": "",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	27 "copied_from_job_id": null,
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	28 "create_time": "2025-05-27T08:07:08.549227",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	29 "dependencies": [],
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	30 "exit_code": 0,
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	31 "external_id": "15664",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	32 "galaxy_version": "24.2",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	33 "handler": null,
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	34 "history_id": "40971d80b8a8a53c",
c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	35 "id": "beecbc66855f4047",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	36 "inputs": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	37 "domestication_csv": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	38 "id": "df3910bf12e3ecf9",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	39 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	40 "uuid": "61aea63f-fa8f-4855-b597-d298379d415c"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	41 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	42 "genbank_files1": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	43 "id": "40971d80b8a8a53c",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	44 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	45 "uuid": "2ff46bb9-5b06-4cad-b98f-afa1443697b5"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	46 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	47 "genbank_files2": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	48 "id": "722a3e09b8314bb2",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	49 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	50 "uuid": "99c508b5-234a-4eba-b9d2-05204eaa2ec8"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	51 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	52 "genbank_files3": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	53 "id": "1cc8aca787b2436a",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	54 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	55 "uuid": "0a0b7db9-a3ac-4999-b1c9-498618831d59"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	56 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	57 "genbank_files4": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	58 "id": "8026227525c5f951",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	59 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	60 "uuid": "a2994595-0a40-48ba-a369-db577710e99a"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	61 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	62 "genbank_files5": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	63 "id": "38afb044c6b21b09",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	64 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	65 "uuid": "c8b3e40f-a0a8-414e-a56c-bd71775b2218"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	66 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	67 "genbank_files6": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	68 "id": "58f07e41a8a4674f",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	69 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	70 "uuid": "c813a93e-97c6-4f6a-bcd0-dcdbd93728e2"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	71 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	72 "genbank_files7": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	73 "id": "3e34fe414480d6bc",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	74 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	75 "uuid": "368b2cf8-f34e-427d-888e-b431a4b28c87"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	76 }
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	77 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	78 "job_messages": [],
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	79 "job_metrics": [],
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	80 "job_runner_name": null,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	81 "job_stderr": "",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	82 "job_stdout": "",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	83 "model_class": "Job",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	84 "output_collections": {
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	85 "domesticated_gb": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	86 "id": "722a3e09b8314bb2",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	87 "src": "hdca"
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	88 }
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	89 },
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	90 "outputs": {
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	91 "__new_primary_file_domesticated_gb\|p14_CMVp__": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	92 "id": "8b52218386489a1b",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	93 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	94 "uuid": "9ec489c3-d7d2-4c8e-85ed-7c608bfffc49"
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	95 },
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	96 "__new_primary_file_domesticated_gb\|p16_bGHpolyA__": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	97 "id": "7df4279c30fbf11a",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	98 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	99 "uuid": "e56aa342-fc45-4a28-befa-290f5722a67c"
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	100 },
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	101 "__new_primary_file_domesticated_gb\|p18_CMVp__": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	102 "id": "5a11a7ea1c4a0b78",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	103 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	104 "uuid": "8beec3f0-36c6-4994-b890-35fbba7d1c32"
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	105 },
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	106 "__new_primary_file_domesticated_gb\|p19_mNeoGreen__": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	107 "id": "f727b077209f6bea",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	108 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	109 "uuid": "7309490c-224e-46b1-82d1-94102829a851"
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	110 },
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	111 "__new_primary_file_domesticated_gb\|p22_PGKpolyA__": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	112 "id": "77c3effc68e335c0",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	113 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	114 "uuid": "4d4c783f-d229-44b3-af52-0e6616cd140b"
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	115 },
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	116 "__new_primary_file_domesticated_gb\|p3_2_CAG__": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	117 "id": "a5683b91f8081320",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	118 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	119 "uuid": "08b3572e-4f1c-4fe3-ac3c-8dcf2ec05ce2"
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	120 },
f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	121 "__new_primary_file_domesticated_gb\|p7_gfp_sequence__": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	122 "id": "3e3b60188e62bb8d",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	123 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	124 "uuid": "6fe9d54a-584a-470a-82a5-b16b0ed0b7e1"
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	125 },
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	126 "domesticated_zip": {
c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	127 "id": "beecbc66855f4047",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	128 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	129 "uuid": "598cd11f-0878-422d-b265-3e7d109f52d4"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	130 }
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	131 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	132 "params": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	133 "__input_ext": "\"input\"",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	134 "adv": "{\"allow_edits\": true, \"use_file_names_as_ids\": true}",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	135 "chromInfo": "\"/tmp/tmpmo0pk3jj/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	136 "dbkey": "\"?\"",
1 bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 0 diff changeset	137 "genbank_files": "{\"values\": [{\"id\": 1, \"src\": \"hdca\"}]}",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	138 "methylation_protection": "false"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	139 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	140 "state": "ok",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	141 "stderr": "\rrecord: 0%\| \| 0/7 [00:00<?, ?it/s, now=None]\rrecord: 43%\|\u2588\u2588\u2588\u2588\u258e \| 3/7 [00:01<00:02, 1.68it/s, now=None]\r \r",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	142 "stdout": "Part names were not truncated\n",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	143 "tool_id": "domestication",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	144 "tool_stderr": "\rrecord: 0%\| \| 0/7 [00:00<?, ?it/s, now=None]\rrecord: 43%\|\u2588\u2588\u2588\u2588\u258e \| 3/7 [00:01<00:02, 1.68it/s, now=None]\r \r",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	145 "tool_stdout": "Part names were not truncated\n",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	146 "update_time": "2025-05-27T08:07:20.210958",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	147 "user_email": "planemo@galaxyproject.org",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	148 "user_id": "40971d80b8a8a53c"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	149 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	150 "status": "success",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	151 "test_index": 0,
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	152 "time_seconds": 34.19329214096069,
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	153 "tool_id": "domestication",
1 bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 0 diff changeset	154 "tool_version": "0.1.0+galaxy1"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	155 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	156 "has_data": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	157 "id": "domestication-0"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	158 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	159 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	160 "data": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	161 "inputs": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	162 "adv\|allow_edits": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	163 "adv\|use_file_names_as_ids": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	164 "domestication_csv": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	165 "id": "2d30278c16dd9bf8",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	166 "src": "hda"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	167 },
1 bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 0 diff changeset	168 "genbank_files": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	169 "id": "1cc8aca787b2436a",
1 bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 0 diff changeset	170 "src": "hdca"
bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 0 diff changeset	171 },
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	172 "methylation_protection": true
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	173 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	174 "job": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	175 "command_line": "mkdir 'metoutdir_gb' && mkdir 'outdir_zip' && mkdir 'outdir_gb'&& cp '/tmp/tmpmo0pk3jj/files/8/8/c/dataset_88ce7dbb-b512-47e2-b4c4-a33e25f510f5.dat' 'domestication_csv.csv' && python '/home/rkhaled/galaxytools/tools/domestication/domestication.py' --files_to_domestication '/tmp/tmpmo0pk3jj/files/3/e/0/dataset_3e0edcaf-c663-4aaa-833b-4d28d353ff86.dat,/tmp/tmpmo0pk3jj/files/c/b/e/dataset_cbeb8071-98da-4bcd-829a-3eebaaec359e.dat,/tmp/tmpmo0pk3jj/files/1/9/9/dataset_199870d8-d8a6-4437-8843-802fe43f55a3.dat,/tmp/tmpmo0pk3jj/files/5/8/2/dataset_582e346f-d990-4e67-aa16-75c5854a9c4e.dat,/tmp/tmpmo0pk3jj/files/5/a/9/dataset_5a962295-b81c-4eac-95f9-cb9b715227ec.dat,/tmp/tmpmo0pk3jj/files/a/d/6/dataset_ad62bd0c-a6a8-40dc-b75e-5caff07b002f.dat,/tmp/tmpmo0pk3jj/files/2/4/6/dataset_2462927e-bb24-4865-b0d7-233193737d9b.dat' --csv_file 'domestication_csv.csv' --file_name_mapping '/tmp/tmpmo0pk3jj/files/3/e/0/dataset_3e0edcaf-c663-4aaa-833b-4d28d353ff86.dat:p3_2_CAG.gb,/tmp/tmpmo0pk3jj/files/c/b/e/dataset_cbeb8071-98da-4bcd-829a-3eebaaec359e.dat:p7_gfp_sequence.gb,/tmp/tmpmo0pk3jj/files/1/9/9/dataset_199870d8-d8a6-4437-8843-802fe43f55a3.dat:p14_CMVp.gb,/tmp/tmpmo0pk3jj/files/5/8/2/dataset_582e346f-d990-4e67-aa16-75c5854a9c4e.dat:p16_bGHpolyA.gb,/tmp/tmpmo0pk3jj/files/5/a/9/dataset_5a962295-b81c-4eac-95f9-cb9b715227ec.dat:p18_CMVp.gb,/tmp/tmpmo0pk3jj/files/a/d/6/dataset_ad62bd0c-a6a8-40dc-b75e-5caff07b002f.dat:p19_mNeoGreen.gb,/tmp/tmpmo0pk3jj/files/2/4/6/dataset_2462927e-bb24-4865-b0d7-233193737d9b.dat:p22_PGKpolyA.gb' --use_file_names_as_id 'true' --allow_edits 'true' --output_dom 'output_zip.zip' --output_gb_dom 'outdir_gb' --output_methprot 'metoutdir_gb' --methylation_protection 'true' && cp 'output_zip.zip' '/tmp/tmpmo0pk3jj/job_working_directory/000/18/outputs/dataset_b8f77694-af17-44c7-8ca7-94039b4f9f10.dat'",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	176 "command_version": "",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	177 "copied_from_job_id": null,
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	178 "create_time": "2025-05-27T08:07:43.266253",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	179 "dependencies": [
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	180 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	181 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	182 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	183 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	184 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	185 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	186 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	187 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	188 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	189 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	190 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	191 "resolves_simple_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	192 "use_local": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	193 "versionless": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	194 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	195 "dependency_type": "conda",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	196 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	197 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	198 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	199 "name": "flametree",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	200 "version": "0.1.11"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	201 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	202 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	203 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	204 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	205 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	206 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	207 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	208 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	209 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	210 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	211 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	212 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	213 "resolves_simple_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	214 "use_local": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	215 "versionless": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	216 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	217 "dependency_type": "conda",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	218 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	219 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	220 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	221 "name": "biopython",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	222 "version": "1.85"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	223 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	224 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	225 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	226 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	227 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	228 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	229 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	230 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	231 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	232 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	233 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	234 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	235 "resolves_simple_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	236 "use_local": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	237 "versionless": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	238 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	239 "dependency_type": "conda",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	240 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	241 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	242 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	243 "name": "proglog",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	244 "version": "0.1.10"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	245 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	246 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	247 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	248 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	249 "auto_init": true,
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	251 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	252 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	253 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	254 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	255 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	256 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	257 "resolves_simple_dependencies": true,
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	259 "versionless": false
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	260 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	261 "dependency_type": "conda",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	262 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	263 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	264 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	265 "name": "genedom",
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0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	267 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	268 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	269 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	270 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	271 "auto_init": true,
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	273 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	274 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	275 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	276 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	277 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	278 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	279 "resolves_simple_dependencies": true,
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4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	284 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	285 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	286 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	287 "name": "pandas",
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	290 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	291 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	292 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	293 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	294 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	295 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	296 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	297 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	298 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	299 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	300 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	301 "resolves_simple_dependencies": true,
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	303 "versionless": false
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	305 "dependency_type": "conda",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	306 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	307 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	308 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	309 "name": "dnacauldron",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	310 "version": "2.0.12"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	311 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	312 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	313 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	314 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	315 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	316 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	317 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	318 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	319 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	320 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	321 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	322 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	323 "resolves_simple_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	324 "use_local": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	325 "versionless": false
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4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	328 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	329 "exact": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	330 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	331 "name": "pdf-reports",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	332 "version": "0.3.9"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	333 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	334 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	335 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	336 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	337 "auto_init": true,
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	339 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	340 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	341 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	342 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	343 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	344 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	345 "resolves_simple_dependencies": true,
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	347 "versionless": false
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	349 "dependency_type": "conda",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	350 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	352 "model_class": "MergedCondaDependency",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	353 "name": "sequenticon",
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	356 {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	357 "cacheable": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	358 "dependency_resolver": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	359 "auto_init": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	360 "auto_install": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	361 "can_uninstall_dependencies": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	362 "ensure_channels": "conda-forge,bioconda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	363 "model_class": "CondaDependencyResolver",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	364 "prefix": "/home/rkhaled/miniconda3",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	365 "read_only": false,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	366 "resolver_type": "conda",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	367 "resolves_simple_dependencies": true,
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4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	372 "environment_path": "/home/rkhaled/miniconda3/envs/mulled-v1-ebf0296502565ba7d0f6435a4c3184b56b9905bb762f63578baf4e839a11ad14",
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	375 "name": "dna_features_viewer",
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c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	384 "id": "6c90a7736cfec646",
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10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	389 "uuid": "88ce7dbb-b512-47e2-b4c4-a33e25f510f5"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	390 },
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10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	394 "uuid": "3e0edcaf-c663-4aaa-833b-4d28d353ff86"
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10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	399 "uuid": "cbeb8071-98da-4bcd-829a-3eebaaec359e"
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10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	402 "id": "d833721564461fe0",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	403 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	404 "uuid": "199870d8-d8a6-4437-8843-802fe43f55a3"
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	406 "genbank_files4": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	407 "id": "bc67cca121169b32",
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10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	409 "uuid": "582e346f-d990-4e67-aa16-75c5854a9c4e"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	410 },
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10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	412 "id": "2c119c7d607245b7",
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10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	414 "uuid": "5a962295-b81c-4eac-95f9-cb9b715227ec"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	415 },
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10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	417 "id": "654b689f382d7faf",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	418 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	419 "uuid": "ad62bd0c-a6a8-40dc-b75e-5caff07b002f"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	420 },
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10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	422 "id": "848a7ec9db54f91c",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	423 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	424 "uuid": "2462927e-bb24-4865-b0d7-233193737d9b"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	425 }
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	428 "job_metrics": [],
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	429 "job_runner_name": null,
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	431 "job_stdout": "",
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10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	435 "id": "8026227525c5f951",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	436 "src": "hdca"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	437 }
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	438 },
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8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	440 "__new_primary_file_methprot_gb\|p14_CMVp__": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	441 "id": "552487cd77e5739b",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	442 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	443 "uuid": "47a78a3c-f714-4a3b-baf6-db74ec3e57ec"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	444 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	445 "__new_primary_file_methprot_gb\|p16_bGHpolyA__": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	446 "id": "c150df1632d3bf7a",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	447 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	448 "uuid": "9ec7ff7e-c752-40ab-8e30-d00bce534323"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	449 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	450 "__new_primary_file_methprot_gb\|p18_CMVp__": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	451 "id": "3b8df2fa2b4da081",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	452 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	453 "uuid": "ef3876f0-595c-4e36-b1d2-424ac4f3c495"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	454 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	455 "__new_primary_file_methprot_gb\|p19_mNeoGreen__": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	456 "id": "ea8abe36fc9e84c6",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	457 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	458 "uuid": "d9db4707-d9a0-4578-861a-4536b24e3d55"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	459 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	460 "__new_primary_file_methprot_gb\|p22_PGKpolyA__": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	461 "id": "195917444a0d1fd3",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	462 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	463 "uuid": "ebcddc78-8aec-4aa7-a99f-1f6c98312abf"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	464 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	465 "__new_primary_file_methprot_gb\|p3_2_CAG__": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	466 "id": "07090fd15ab7700f",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	467 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	468 "uuid": "f565adba-00b9-4476-a1dc-f917d7695ed7"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	469 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	470 "__new_primary_file_methprot_gb\|p7_gfp_sequence__": {
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	471 "id": "181ca79c6e3f2d04",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	472 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	473 "uuid": "d36b2983-c229-453a-b3c5-d6e44ab877f5"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	474 },
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	475 "domesticated_zip": {
c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	476 "id": "bbfdb6491da014b1",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	477 "src": "hda",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	478 "uuid": "b8f77694-af17-44c7-8ca7-94039b4f9f10"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	479 }
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	480 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	481 "params": {
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	482 "__input_ext": "\"input\"",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	483 "adv": "{\"allow_edits\": true, \"use_file_names_as_ids\": true}",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	484 "chromInfo": "\"/tmp/tmpmo0pk3jj/galaxy-dev/tool-data/shared/ucsc/chrom/?.len\"",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	485 "dbkey": "\"?\"",
4 f78651af72e4 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 1 diff changeset	486 "genbank_files": "{\"values\": [{\"id\": 3, \"src\": \"hdca\"}]}",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	487 "methylation_protection": "true"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	488 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	489 "state": "ok",
8 4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 7 diff changeset	490 "stderr": "\rrecord: 0%\| \| 0/7 [00:00<?, ?it/s, now=None]\rrecord: 43%\|\u2588\u2588\u2588\u2588\u258e \| 3/7 [00:01<00:02, 1.73it/s, now=None]\r \r",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	491 "stdout": "Part names were not truncated\n",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	492 "tool_id": "domestication",
8 4bfdec0be6b1 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 7 diff changeset	493 "tool_stderr": "\rrecord: 0%\| \| 0/7 [00:00<?, ?it/s, now=None]\rrecord: 43%\|\u2588\u2588\u2588\u2588\u258e \| 3/7 [00:01<00:02, 1.73it/s, now=None]\r \r",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	494 "tool_stdout": "Part names were not truncated\n",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	495 "update_time": "2025-05-27T08:07:54.372698",
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	496 "user_email": "planemo@galaxyproject.org",
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	497 "user_id": "40971d80b8a8a53c"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	498 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	499 "status": "success",
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	500 "test_index": 1,
10 c52967fb95da planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 8 diff changeset	501 "time_seconds": 34.02547550201416,
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	502 "tool_id": "domestication",
1 bf8cd9487e33 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: 0 diff changeset	503 "tool_version": "0.1.0+galaxy1"
0 8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	504 },
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	505 "has_data": true,
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	506 "id": "domestication-1"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	507 }
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	508 ],
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	509 "version": "0.1"
8fd9af4cb080 planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Examples/blob/master/templates/template1.ipynb commit 6ae809b563b40bcdb6be2e74fe2a84ddad5484ae tduigou parents: diff changeset	510 }

Mercurial > repos > tduigou > domestication

annotate output.json @ 10:c52967fb95da draft default tip