Mercurial > repos > pimarin > data_manager_fetch_plasmidfinder

annotate plasmidfinder-db/NT_Rep.fsa @ 3:5ffc68b4ec04 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
author pimarin
date Fri, 17 Feb 2023 14:03:19 +0000
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5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
pimarin
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diff changeset
1 >rep3_1_rep63A(pAW63)_BTH011655
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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2 atgaatacagtacaaaaagctattgaattaatactacataaagggttacgaaaatataaatctaaaaattcgaaagctggactagtatctattgcacatcaagagaaatttgaaagcaaagtgttaaatgggaagaagaataaaaagggttcaatttttattactcgtaagaaagaagatttaagcgctaagtttgggactcgtggcgtagtattatcttctgaagaagctgtactggatcatgtaggacaggcttctcactggacacctaatgtatataattttggtacatatggtcaaaatggtcttcgtacaattgtagggcatacggaaaagaacctacaacaaattaactgttttgttattgatattgattcaaagtcattccctatgactgcgattaatgatgtggcattaaatgcaggttttggtgtaccgactatgattcttgaaacaacgaagggttatcaagtgtattatgtgttggataaagctgtgtacgtatcaaataacaagaactttatagctattaaatcagcgaaacgtatctctcaaaacttaagagaaatgtttgctgagagtttgccaaacgtggatttaacatgcaatcactttgggttcttcagaatgccttcagttcaaaatgttgtgatgttctttgaggaaaatgtgtatacattcaaggagttacaggagtggagcaagcgtcaagacgacaataagggaaatgaacagtttcataatgtgatagagagtccttttgctaaaaacactcctgtagagcaaccaaagcaaatggatgaactatggttcaaacaagtaattagttgtacaaatgtatctccaaaacaaacaaaggcagggcgaaacaatgcgatttttaccctttctttagcgtgtttccaaagtcaatatgctattaaagacacaatggacttaatggatcagtttaatagtaacctagagcaaccgctagatcacacagaggttagaggaattgttatgtctgcatactctggaaagtaccaggcagcacataaagattacatagagcgtttattacaaacatacggtgtgggtggacaagcttcagcttttcgtgcaccttcagtattgtggaagaaacataagaaacaacgtaaggatcgtgtgcgtagtcattggcatgaatgggaagctgacattattactttcttatccatgaattcaaaaaacaaacctgtgctatactttacacaatcagaactgtgcgaagcgcttaacattccccgcagcacattaaacacggttctaaagaagagtacaaaaatccataaaacggttgagggaaaagggaaaacagcaaaaacaggattttctacaatcggcatgctaattgcatttgcattaaaagaaaatggcaaaagaagagagagctatttaaactacttacaagggctatttcctcaaatgggtaatattcttggacaagcaaaaacaagtaacgccatagaagaacaagagacactttacagcatattagaagggctaccagctggttaa
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
pimarin
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3 >rep3_2_rep165(pBMB165)_DQ242517
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
pimarin
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4 atgaatacagtacagaaagctattaatcttatacttcataaagggatacgaaaatataaatctaaaaactcaaaagctgctctagtatctattacaaaacaagagaaatttgaagacaaaatgctgaatggtaagaagaataaaaaaggatctatttttattactcgtaaaaaagctgatttaagcgcaccttttggtacaagaggagtagtgttaacatctgaggaagctacactggatcatgttggacaagcttctcactggactcctaatgtatataattttggtacatatagtgaaaatggccttcgtacaattgttggccacactgaaaaaaacctacaacaaattaattgctttgtaattgatattgattcaaagtcattcccaatgaaagcgattaatgatgttgcgttaaatgctggctttggtgtgccaactatgattcttcaaacaacaaagggttaccaggtgtattacgtgctggataaagctgtatatgtaacgaataaaaagaactatattgctattaaatcagcaaaaagaatctctcaaaacttgagagaaatgtttgctgaaagcctaccacaagtagatttaacatgtaatcactttggcttcttcagaatgccttcagaagagaatattattatgttctttgaggaaaatgtatattctttcaaggagttgcaggattggagtaagagacaagatgataacaaaggtaaagaatttttcgcaattccaggtgaaaataacgtaattgaaactccattttcaaaaaacaaacctgtagagcagccaaaacaggtagaagaagcgtggtttaagcaagttatcaattgtacgaacatagcgccacaacaaacaaaagcagggcgtaataatgcaatttttactctttcattagcatgtttccaaagtgaagtatcaattaaagaaacactagatatgatggaccagtttaatagcaacctggaacagcctttagatcatgttgaggttagagggattgtcatgtctgcatattcaggaaagtaccaggctgctcataaagattacatagatcgtctacttcaaacatatgcgacacctgaacaagttaattcgtttagatcaccagctgcattttggagaaaacataaaaagaaacgtgaagatcgagtacgttctcactggcatgagtgggaagcagatattattgctttcctgtcaattaattcaaaaaataaacctgtgctatactttacacaaaaagaactatgtgaagctattaatattcctagaagtactctaaatactgtcttgaaaaagagtaataaaatatataaaactgttgaaggaaaagggaaaactgcaaaaacaggcttttcaacaattggcatgttaatttcctttgcattacgtgaaaaagggcaaaaaagggagagttatttaatctatttaaacgagctgtttccccaaatgggtaatatcttactacaagcaaaaaacaatagcgctatggcagaagaaacggcattatacagcctaatcgaagggctgccagctggttaa
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
pimarin
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diff changeset
5 >rep3_3_rep(pBT9727)_CP000047
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
pimarin
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6 atgaatacagtacagaaagctattaatcttatacttcataaaggtttacgaaaatataaatctaaaaactcaaaagctgctctagtatcaattacaaaacaagagaaatttgaagacaaaatgctgaatggtaagaagaataaaaaaggatctatttttatcactcgtaaaaaagctgatttaagtgcaccgtttggtacaagaggagtagtgttaacatctgaggaagctgcactggatcatgttggacaagcttctcactggactcctaatgtatataattttggtacatatagtgaaaatggtcttcgtacaatcgttgggcatacggaaaagaacttacagcaaattaattgcttcgtaattgatattgattcaaagtcattcccaatgacagcaatcaatgatgttgcgttaaatgctggttttggtgtgccgactatgatccttcaaactacaaagggttaccaagtatattatgtgttagataaagctgtatatgtaacaaataaaaagaactatattgctattaaatcagcaaaaagaatctctcaaaacttgagagaaatgtttgctgaaagcctaccacaagtagatttaacgtgtaatcattttggcttcttcagaatgccttcggaagagaatattattatgttctttgaggaaaatgtatattctttcaaggaactgcaggattggagtaagagacaagatgataacaaaggtaaagaatttttcgcaattccaggtgaaaacaacgttattgaaactccattttctaaaaataaacctgtagagcagccaaaacaggtagaagaagcttggtttaagcaaattataaattgtacgaatatagcgccacaacaaacaaaagcagggcgtaataatgcgattttcactctttcattagcttgtttccaaagtgaaatatcaattaaggaaacactagatatgatggatcagtttaatagtaacctggaacaacctttggatcatgctgaggttagaggaattgtcatgtctgcatattcaggaaaataccaggctgcacacaaagactacattgatcgtctacttcaaacatatgggacacctggacaagttaattcatttagatcaccagctgcattttggagaaaacacaaaaagcaacgtgaggatcgagtacgttctcattggcatgagtgggaagcggatattattgcgttcctgtcgatgaattcgaacaacaaacctgtgctatactttacacaaaaagaattatgtgaagcaattaatattcctagaagtaccctaaacactgttctgaaaaagagcaataaaatatataagactgttgaagggaaaggaaaaactgcaaaaacaggtttttcaacaattggcatgttaatttcgtttgcattacgtgaaaaaggagaaaaaagagagagttatctaagctatttaaacgagctgtttccccaaatgggtaatatcttactacaagcaaaaaacaatagcgctatggcagaagaaacagtgtcttatagcctaatcgaagggctaccagctggttaa
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
pimarin
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7 >rep3_4_CDS38(pOX2)_NC002146
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
pimarin
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8 atgaatacagtacaaaaagctatcgaattaatactacataaaggattacgaaaatataaatctaaaaattcaaaagctggattagtatctattgctaatcaagagaaatttgaaagtaaagtgctcaatggtaagaagaataaaaaaggatcaatttttattactcgtaagaaagaagatttaagggctaagtttgggactcgtggcgttgtattatcatctgaagaagctgtactggatcatgttggacaggcttctcactggacacctaatgtatataattttggtacatatggtcaaaatggtcttcgtacaattgtagggcatacggaaaagaacctacaacaaattaactgttttgttattgatatagattcaaagtcattccctatgactgcaatcaatgatgtggcacttaatgcaggttttggtgtaccgactatgattcttgaaacaacaaagggttatcaagtgtattatgtgttggataaagcggtgtacgtatcaaacaacaagaactttatagctattaaatcagcgaaacgtatttctcaaaatctacgagaaatgtttgctgatagtttgccaaacgtggatttaacatgcaatcactttggtttcttcagaatgccttcagttcaaaatattgtaatgttctttgaggaaaatgtttatacattcaaggagttacaagaatggagcaagcgacaagacgacaacaaaggcaatgaacagtttcataatgtaatagagagtccttttgctaaaaacgctcctgtagagcagccgaagcaaatggatgaattatggttcaaacaagtaattagttgtacaaatgtatctccaaaacaaacaaaagcagggcgaaacaatgcgattttcaccctttctttagcgtgttttcaaagtcaatatgctattaaagacacaatggacttaatggatcagtttaatagtaacctagagcaaccactagagcatactgaagttagagggattgtgatgtctgcatactctggaaaataccaggcggcacataaagattacatagaacgattactacaaacatatggaatgggacaggcttcagcgttccgtgcgccttctgtactttggaagaaacataagaaacaacgtaaagatcgtgtgcgtagtcattggcacgagtgggaagctgatattattaccttcctatccatgaattcaaacaacaaacctgtgctatactttacacaatcagaactgtgcgaagcgcttaacgttccccgcagcacattaaacacggttctaaaaaagagtacaaaaatctataaaacggttgagggaaaagggaaaacagcaaaaacaggattatctacacttggaatgctaattgcgtttgctttaaaagaaaatggcaaaagaagagagagctacctaaactacttacaagggctattccctaaaacaggtaatattcttgaacaagcaaaaacaagcaatgtcatggaggaacaagaaacactatacggcatattggaagggctaccagctggttaa
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
pimarin
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9 >repUS2_1_repA(pBI143)_BFU30316
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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10 Atgatactaaataggaaaataatatttcccttaatattgtttttatggaaaataatagtttactttgtggagaataatatttcccaaaaacatatcaaaatggaaaataaaaaagcagttaagttaaccgattttcaaaagaagcaagaaaatccttttatgaaaacaagctatagaggtattgaaaatcatgttgttaaaaagtataagagtaatagtggtggcgataagagagctgtagtagctttagccgacactgaaactggagaagtgtttaagacttcgtttatccgtcaaatagaagtagatgaagaacaattcactaaattgtatctttctaactttgctgcattctttgacctatcacaagcagctattcgggtttttggttactttatgacctgcatgaaacccaaaaatgatttaatcattttcaatagaaaaaaatgcctagaatataccaaatacaaaacagacaaagccgtttataaaggacttgcagaacttgtaaaagctgaaatcatagcccgaggaccagccgataatctttggtttattaatcctctgatagtattcaatggtgaccgagtgacatttgctaaaacatacgtttcggaaaaagactttagctgcccaaaagaaagaagaagcagagaaacgacaattatcacttggctttga
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
pimarin
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11 >repUS3_1_repM200(pBM200)_DQ437521
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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12 Gtgaatttggaaaaaaaacttgctgaagcggaaaaaaaggcaagattaaaagatttcaaaaataaatcatattcatcagaagaagtctctgatattcaaagatcattattagatctaatgcaggaaattacaggtgaaaaacattttatcggtaaggaaaaggatatttttgcaggggagccgtttaatcaaactatgcatagaaatttagatttgttgactagaataaattatttaacaactgctgaggaaagctttttgtttagaattcaagcttatttagagtttaaaagtaatgttattatttgcagagaagacaaatttaaaaagaaacgtaataatgttgtagatgatgattatgagcttcctaaggcagcaacagtttcagaaattgcagaaatgattggtaagtctagggaaaaaacttctttaattatgaattctttaaagaaaaaagagattttattaaatcctgaaggtgcaggacaagttagtgaaaatggtcgttctgtaagccctagaacgtggattgtaaatccttatattatgatttgtgctccgcgtaaaaacgaagttaagttagataaattaacaatgagattatttcagcattctttaaaaaaccttaaagatccgaatggaaaaaaagtaaatttgccagttagatttttttaa
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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13 >repUS6_1_rep(pFL1)_NC002132
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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14 atgagttataaaaaagaaagtaaattatcaaattatgataagcataaagagaatccgtttttaaaagaagcagtagaacaaattcagcataatattgtaaaaaaatacaagagtacaggaggtacaagtcaaagcgcaattttacaagctgtaaattcagatggagagttagttggtcatacttcgtttattagacaaatagaagtagatgaagagcaattcacgaaaatttatttggctcaattttcttctttttggaatttaaaaacacaagcaataagggtttttggttatattatgacgaaattaataccaaggcaagatacttttatgttttttctagatgaatgtatggaatacacaggctataaaggcaaaaacagtatttatattggtcttactagtttagtagaaaacaatataattgcgaggggtagaaatgatagccattattttataaatccaatggtagcgtttaatggggatagagtaacgtttgcaaaacttatataa
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
pimarin
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15 >repUS8_1_ORF1(pOg32)_LOPPOG32
5ffc68b4ec04 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_plasmidfinder commit 5c04f6f49deca3735a752e5ac29027ba9d5ff000-dirty
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16 Atgaccaaaacatctattgaaaagccggccccttctaacagccggctaagtgtaaaaaatgtttacacttcatctataaagtggagcattgaccgtctaacgattgttggagaacttgctccattcttacctgcggggtatacaactaacaaaatatctggcgaagttaaaagcagaattactattgaagatatgttcaaagtttttgaacattttggtcattgtcgtttgtccggaaatggttatcaaatgataaccgatgatggagagaacgttgcttattttgaacgattaaagtttgacaaaaataaagggcgcttagattttaacccgaacaagttagatagtttttttgaaaatggcttgaagcaatttatatctgatttattcatcacgccccatttttcaagggctgacattgctgccgatatttttgatgtccccgatgaaaaagttgtgtcttaccgattaggtgaaccagttggaaatacatttttttatggaaaaagtggagatttacagaccgcgtattttggtgccaggtcatcagagaaacaaataaggctctataacaaaagaattgaaagaatcaaaaaaggcagaattgaagaccttaaagaccccgaacaatgctactggcggttagaactacaactaagacgcgggagggctgatgattttcaaaagcaggtcgacgagagtttgaaacatttttattctccgcaagattttcctgatgatgtgtctgtgaacagcagaatatttttgaaagggctacttgcagaccctgataactgggctagaatatcaagaccaacgaagtcaaaatatagacagatagaggaacgagttgcctcttctgacaaattaacaattgaattgaaaaaaactttttctcaacaaaataaaaaaatagaaaaagaattgaagaattggctacagacttttcaagttttgtag