Mercurial > repos > mvdbeek > package_ngs_sdk_1_1_3

annotate tool_dependencies.xml @ 0:f530f97e76ea draft

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planemo upload commit 92d32947393757598262fbaed175b2c6fd84c181
author mvdbeek
date Fri, 25 Sep 2015 09:26:15 -0400
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children b0e9867f0dfb
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="perl" version="5.18.1">
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4 <repository changeset_revision="2590d4683481" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="ngs_sdk" version="1.1.3">
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7 <install version="1.0">
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8 <actions>
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9 <action target_filename="ngs-1.1.3.tar.gz" type="download_file">https://github.com/ncbi/ngs/archive/1.1.3.tar.gz</action>
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10 <action type="shell_command">
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11 tar -xf ngs-1.1.3.tar.gz
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12 </action>
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13 <action type="change_directory">ngs-1.1.3/ngs-sdk</action>
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14 <action type="autoconf">--prefix=$INSTALL_DIR --build=$INSTALL_DIR</action>
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15 <action type="set_environment">
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16 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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17 <environment_variable action="set_to" name="NGS_SDK_DIR">$INSTALL_DIR</environment_variable>
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18 </action>
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19 </actions>
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20 </install>
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21 <readme>
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22 ncbi-ngs-sdk, required for sra-tools package.
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23
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24 </readme>
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25 </package>
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26 </tool_dependency>