Mercurial > repos > mvdbeek > package_ngs_sdk_1_1_3
view tool_dependencies.xml @ 0:f530f97e76ea draft
planemo upload commit 92d32947393757598262fbaed175b2c6fd84c181
author | mvdbeek |
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date | Fri, 25 Sep 2015 09:26:15 -0400 |
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children | b0e9867f0dfb |
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<?xml version="1.0"?> <tool_dependency> <package name="perl" version="5.18.1"> <repository changeset_revision="2590d4683481" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="ngs_sdk" version="1.1.3"> <install version="1.0"> <actions> <action target_filename="ngs-1.1.3.tar.gz" type="download_file">https://github.com/ncbi/ngs/archive/1.1.3.tar.gz</action> <action type="shell_command"> tar -xf ngs-1.1.3.tar.gz </action> <action type="change_directory">ngs-1.1.3/ngs-sdk</action> <action type="autoconf">--prefix=$INSTALL_DIR --build=$INSTALL_DIR</action> <action type="set_environment"> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> <environment_variable action="set_to" name="NGS_SDK_DIR">$INSTALL_DIR</environment_variable> </action> </actions> </install> <readme> ncbi-ngs-sdk, required for sra-tools package. </readme> </package> </tool_dependency>