Mercurial > repos > mvdbeek > package_ngs_sdk_1_1_3

comparison tool_dependencies.xml @ 0:f530f97e76ea draft

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planemo upload commit 92d32947393757598262fbaed175b2c6fd84c181
author mvdbeek
date Fri, 25 Sep 2015 09:26:15 -0400
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children b0e9867f0dfb
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-1:000000000000 0:f530f97e76ea
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="perl" version="5.18.1">
4 <repository changeset_revision="2590d4683481" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package>
6 <package name="ngs_sdk" version="1.1.3">
7 <install version="1.0">
8 <actions>
9 <action target_filename="ngs-1.1.3.tar.gz" type="download_file">https://github.com/ncbi/ngs/archive/1.1.3.tar.gz</action>
10 <action type="shell_command">
11 tar -xf ngs-1.1.3.tar.gz
12 </action>
13 <action type="change_directory">ngs-1.1.3/ngs-sdk</action>
14 <action type="autoconf">--prefix=$INSTALL_DIR --build=$INSTALL_DIR</action>
15 <action type="set_environment">
16 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
17 <environment_variable action="set_to" name="NGS_SDK_DIR">$INSTALL_DIR</environment_variable>
18 </action>
19 </actions>
20 </install>
21 <readme>
22 ncbi-ngs-sdk, required for sra-tools package.
23
24 </readme>
25 </package>
26 </tool_dependency>