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1 <macros>
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2 <xml name="requirements">
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3 <requirements>
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2
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4 <requirement type="package" version="4.0">snpEff</requirement>
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5 </requirements>
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6 </xml>
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7 <xml name="stdio">
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8 <stdio>
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9 <exit_code range=":-1" level="fatal" description="Error: Cannot open file" />
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10 <exit_code range="1:" level="fatal" description="Error" />
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11 </stdio>
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12 </xml>
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2
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13 <token name="@WRAPPER_VERSION@">4.0</token>
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14 <token name="@SNPEFF_VERSION@">SnpEff4.0</token>
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15 <token name="@SNPEFF_DATABASE_URL@">https://snpeff-data.galaxyproject.org/databases/v4_0/</token>
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16 <token name="@EXTERNAL_DOCUMENTATION@">
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17
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18 For details about this tool, please go to:
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19 http://snpeff.sourceforge.net/SnpEff_manual.html
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20
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21 </token>
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22 <token name="@CITATION_SECTION@">------
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23
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24 **Citation**
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25
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26 For the underlying tool, please cite the following two publications:
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27
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28 SnpEff citation:
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29 "A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3.", Cingolani P, Platts A, Wang le L, Coon M, Nguyen T, Wang L, Land SJ, Lu X, Ruden DM. Fly 6(2):80-92, 2012
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30
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31 </token>
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32 <xml name="citations">
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33 <citations>
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34 <citation type="doi">10.4161/fly.19695</citation>
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35 <yield />
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36 </citations>
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37 </xml>
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38 </macros>
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