Mercurial > repos > iuc > seqtk

diff tool_test_output.md @ 9:f9305f8811b8 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit 3c29d3c8710ca23b4c59c2cf8501697331a65ac0
author: iuc
date: Thu, 15 Oct 2015 13:05:45 -0400
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_test_output.md	Thu Oct 15 13:05:45 2015 -0400
@@ -0,0 +1,54 @@
+# Tool Test Results (powered by Planemo)
+
+## Executive Summary
+
+| Test State | Count |
+| ---------- | ----- |
+| Total      | 2 |
+| Passed     | 1 |
+| Error      | 0 |
+| Failure    | 0 |
+| Skipped    | 0 |
+
+
+## Detailed Results
+
+### functional.test_toolbox.TestForTool_seqtk_comp.test_tool_000000
+
+Job Passed
+
+
+### functional.test_toolbox.TestForTool_seqtk_comp.test_tool_000001
+
+Job Error! (State: failure)
+
+Command Line:
+
+```console
+seqtk comp  /tmp/tmpe3FMDm/files/000/dataset_3.dat | awk 'BEGIN{print "#chr\tlength\t#A\t#C\t#G\t#T\t#2\t#3\t#4\t#CpG\t#tv\t#ts\t#CpG-ts"}1'  > /tmp/tmpe3FMDm/files/000/dataset_4.dat
+```
+
+exited with code 0.
+
+#### Problems
+
+
+```console
+History item  different than expected, difference (using diff):
+( /home/hxr/work/tools-iuc/tools/seqtk/test-data/seqtk_cutn.out v. /tmp/tmpe3FMDm/tmp/tmpguZsVkseqtk_cutn.out )
+--- local_file
++++ history_data
+@@ -1,4 +1,2 @@
+->test:1-17
+-AACTGATCGATCGATCG
+->test:29-33
+-ACATG
++#chr	length	#A	#C	#G	#T	#2	#3	#4	#CpG	#tv	#ts	#CpG-ts
++test	33	7	5	5	5	0	0	11	6	0	0	0
+
+```
+
+
+
+
+