Mercurial > repos > iuc > package_seqtk_1_0_r75
view tool_dependencies.xml @ 0:f059064a6de2 draft default tip
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| author | iuc |
|---|---|
| date | Wed, 18 Feb 2015 10:52:48 -0500 |
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<?xml version="1.0"?> <tool_dependency> <package name="seqtk" version="1.0-r75-dirty"> <install version="1.0"> <actions> <action type="shell_command">git clone https://github.com/lh3/seqtk/ seqtk</action> <action type="shell_command">git reset --hard 08b3625c2a7aae3eca9ab056e1adea52ec22cbef</action> <action type="shell_command">make</action> <action type="move_file"> <source>seqtk</source> <destination>$INSTALL_DIR/bin</destination> </action> <action type="set_environment"> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin/</environment_variable> </action> </actions> </install> <readme> Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. It seamlessly parses both FASTA and FASTQ files which can also be optionally compressed by gzip. </readme> </package> </tool_dependency>
