|
13
|
1 <tool id="dmri" name="Download dMRI" version="0.13.0">
|
|
|
2 <description>dataset</description>
|
|
0
|
3 <requirements>
|
|
|
4 <requirement type="package" version="0.13.0">dipy</requirement>
|
|
|
5 </requirements>
|
|
|
6 <command detect_errors="exit_code"><![CDATA[
|
|
2
|
7 python '$__tool_directory__/dmri.py'
|
|
20
|
8 --drmi_dataset $drmi_dataset
|
|
13
|
9 --output_png '$output_png'
|
|
17
|
10 --output_nifti1 '$output_nifti1'
|
|
27
|
11 --output_nifti1_extra_files '$output_nifti1.files_path'
|
|
25
|
12 &>/dev/null
|
|
0
|
13 ]]></command>
|
|
|
14 <inputs>
|
|
20
|
15 <param name="drmi_dataset" type="select" label="dRMI dataset">
|
|
27
|
16 <option value="stanford_hardi" selected="true">stanford_hardi</option>
|
|
|
17 <option value="sherbrooke_3shell">sherbrooke_3shell</option>
|
|
20
|
18 </param>
|
|
0
|
19 </inputs>
|
|
|
20 <outputs>
|
|
16
|
21 <data name="output_png" format="png" label="${tool.name}: middle axial slice without (left) and with (right) diffusion weighting" />
|
|
17
|
22 <data name="output_nifti1" format="nifti1" label="${tool.name}: Nifti1 image" />
|
|
0
|
23 </outputs>
|
|
|
24 <tests>
|
|
|
25 <test>
|
|
|
26 </test>
|
|
|
27 </tests>
|
|
|
28 <help>
|
|
|
29 **What it does**
|
|
|
30
|
|
|
31 -----
|
|
|
32
|
|
|
33 **Options**
|
|
|
34
|
|
|
35 </help>
|
|
|
36 <citations>
|
|
|
37 </citations>
|
|
|
38 </tool>
|
