Mercurial > repos > greg > drmi
view dmri.xml @ 41:da05d30d0642 draft default tip
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author | greg |
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date | Thu, 30 Nov 2017 11:09:07 -0500 |
parents | 1e2dad266344 |
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<tool id="dmri" name="Download dMRI" version="0.13.0"> <description>dataset</description> <requirements> <requirement type="package" version="0.13.0">dipy</requirement> </requirements> <command detect_errors="exit_code"><![CDATA[ python '$__tool_directory__/dmri.py' --drmi_dataset_type '$drmi_dataset_type_cond.drmi_dataset_type' --drmi_dataset $drmi_dataset #if str($drmi_dataset) == "stanford_hardi": --output_png '$output_png' #end if --output_nifti1 '$output_nifti1' --output_nifti1_extra_files '$output_nifti1.files_path' &>/dev/null ]]></command> <inputs> <conditional name="drmi_dataset_type_cond"> <param name="drmi_dataset_type" type="select" label="Select download type"> <option value="dataset" selected="true">Dataset only</option> <option value="dataset and label map">Dataset and label map</option> </param> <when option="dataset"/> <when option="map"/> </conditional> <param name="drmi_dataset" type="select" label="dRMI dataset"> <option value="stanford_hardi" selected="true">stanford_hardi</option> <option value="stanford_t1">stanford_t1</option> </param> </inputs> <outputs> <data name="output_png" format="png" label="${tool.name}: middle axial slice without (left) and with (right) diffusion weighting"> <filter>drmi_dataset == 'stanford_hardi'</filter> </data> <data name="output_nifti1" format="nifti1" label="dRMI dataset $drmi_dataset: ($drmi_dataset_type_cond['drmi_dataset_type']) Nifti1 image" /> </outputs> <tests> <test> </test> </tests> <help> **What it does** ----- **Options** </help> <citations> </citations> </tool>