0
|
1 <tool id="igblastn" name="igBLASTn" version="0.1.0">
|
|
2 <description>Run igBLASTn</description>
|
55
|
3 <command interpreter="bash">
|
|
4 igblastn.sh $input $output
|
0
|
5 </command>
|
|
6 <inputs>
|
|
7 <param name="input" type="data" format="fasta" label="Fasta file"/>
|
|
8 </inputs>
|
|
9 <outputs>
|
|
10 <data name="output" format="text" label="${input.name}-igBLASTn Report"/>
|
|
11 <!--<data name="log" format="text" label="log"/>-->
|
|
12 </outputs>
|
1
|
13 <requirements>
|
|
14 <requirement type="package" version="1.0.0">igBlastn</requirement>
|
|
15 </requirements>
|
0
|
16 <help>
|
43
|
17 Step 1 of the Immune Repertoire tools, generates a report to be parsed with the "igparse" tool.
|
0
|
18 </help>
|
|
19 </tool>
|