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annotate macros.xml @ 53:c112f77f0466 draft

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fix dependencies
author rnateam
date Mon, 01 Feb 2016 10:01:38 -0500
parents 303f6402a035
children 7a05b21c5629
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1 <macros>
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2 <xml name="requirements">
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3 <requirements>
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4 <requirement type="package" version="1.66">biopython</requirement>
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5 <!-- <requirement type="package" version="1.65">biopython</requirement> -->
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6 <requirement type="package" version="0.16">pandas</requirement>
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303f6402a035 pybedtools 069
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7 <!-- <requirement type="package" version="0.7.4">pybedtools</requirement> -->
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8 <requirement type="package" version="0.6.9">pybedtools</requirement>
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9 <!-- <requirement type="package" version="2.24">bedtools</requirement> -->
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8c7125d5ce6f downgrade pybedtools; add pysam dep
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10 <requirement type="package" version="0.8.3">pysam</requirement>
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c112f77f0466 fix dependencies
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11 <requirement type="package" version="4.1.0">gnu_awk</requirement>
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12 <requirement type="package" version="8.22">gnu_coreutils</requirement>
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13 </requirements>
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14 </xml>
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15 <xml name="stdio">
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16 <stdio>
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17 <exit_code level="fatal" range="1:"/>
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18 </stdio>
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19 </xml>
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20 <xml name="citations">
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21 <citations>
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22 <citation type="doi">10.1016/j.molcel.2013.07.001</citation>
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23 </citations>
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24 </xml>
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25 </macros>