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view macros.xml @ 53:c112f77f0466 draft

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fix dependencies
author rnateam
date Mon, 01 Feb 2016 10:01:38 -0500
parents 303f6402a035
children 7a05b21c5629
line wrap: on
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<macros>
    <xml name="requirements">
        <requirements>
            <requirement type="package" version="1.66">biopython</requirement>
            <!-- <requirement type="package" version="1.65">biopython</requirement> -->
            <requirement type="package" version="0.16">pandas</requirement>
            <!-- <requirement type="package" version="0.7.4">pybedtools</requirement> -->
            <requirement type="package" version="0.6.9">pybedtools</requirement>
            <!-- <requirement type="package" version="2.24">bedtools</requirement> -->
            <requirement type="package" version="0.8.3">pysam</requirement>
            <requirement type="package" version="4.1.0">gnu_awk</requirement>
            <requirement type="package" version="8.22">gnu_coreutils</requirement>
        </requirements>
    </xml>
    <xml name="stdio">
        <stdio>
          <exit_code level="fatal" range="1:"/>
        </stdio>
    </xml>
    <xml name="citations">
        <citations>
            <citation type="doi">10.1016/j.molcel.2013.07.001</citation>
        </citations>
    </xml>
</macros>