view retip_train.xml @ 1:9bd6a0a00b0b draft

"planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/retip commit 182a5eaf751237e48ce1fcb5d93a4a7c507ab55c"
author recetox
date Fri, 02 Oct 2020 18:08:53 +0000
parents baa7c8768036
children 6462a0ac9c29
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<tool id="retip_train" name="Retip training" version="@TOOL_VERSION@+galaxy0">
    <description>the Keras model to predict retention times</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements"/>
    <command detect_errors="exit_code"><![CDATA[
            /run.sh trainKeras.R '$descr_train' 'model.hdf5'
      ]]>
    </command>
    <inputs>
        <param name="descr_train" label="Select Descriptors.Feather Dataset" type="data" format="h5"
               optional="false"/>
    </inputs>
    <outputs>
        <data format="h5" name="output1" label="Model.hdf5 Dataset" from_work_dir="model.hdf5"/>
    </outputs>
    <tests>
        <test expect_num_outputs="1">
            <param name="descr_train" value="descriptors.feather"/>
            <output name="output1" file="model.hdf5" ftype="h5" compare="sim_size" delta="1000"/>
        </test>
    </tests>
    <help><![CDATA[
.. class:: infomark

This tool uses ALMA mater: Advanced Learning Machine Algorithms to **train models**.

@HELP@
        ]]>
    </help>
    <expand macro="citations"/>
</tool>