Mercurial > repos > proteore > proteore_prot_features_mouse

changeset 1:0679caefb2a3 draft default tip

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planemo upload commit fb27a6b5de5cd7b269a41be3c85c593b77aa1b18-dirty
author proteore
date Thu, 27 Jun 2019 04:01:38 -0400
parents b9f57cba3172
children
files add_protein_features_mouse.xml
diffstat 1 files changed, 12 insertions(+), 8 deletions(-) [+]
line wrap: on
line diff
--- a/add_protein_features_mouse.xml	Tue May 14 09:47:13 2019 -0400
+++ b/add_protein_features_mouse.xml	Thu Jun 27 04:01:38 2019 -0400
@@ -1,4 +1,4 @@
-<tool id="prot_features_mouse" name="Add protein features (Mouse)" version="2019.05.14">
+<tool id="prot_features_mouse" name="Add protein features (Mouse)" version="2019.06.27">
 <description>[UniProt]
 </description>
 <requirements>
@@ -105,21 +105,25 @@
 
 **Description**
 
-This tool retrieves annotation (protein features) from the UniProt database (Mouse proteins) to enrich your protein IDs list.
+This tool retrieves annotation (protein features) from the UniProt database (Mouse reference proteome) to enrich your protein IDs list.
 
 -----
 
 **Input**
 
-A list of Uniprot Accession Number (e.g. P05090) entered in a copy/paste mode or a file containing one or multiple columns with **at least one column of Uniprot accession number**. If your input file contains other type of IDs, please use the ID_Converter tool.  
+A list of UniProt Accession Number (e.g. P05090) entered in a copy/paste mode or a file containing one or multiple columns with **at least one column of Uniprot accession number**. If your input file contains other type of IDs, please use the ID_Converter tool.  
+
+.. class:: warningmark
+	
+In copy/paste mode, the number of UniProt AccNumber considered in input, is limited to 5000.
 
 -----
 
 **Parameters**
 
-"Select features": three categories of annotation can be retrieved: physico-chemical features, localisation (chromosome, subcellular) and disease information (set to "Yes" by default). Select each feature according to your interest by clicking the corresponding checkbox. 
+"Select features": Select each feature according to your interest by clicking the corresponding checkbox. 
 
-You can get more information about annotations `here <https://www.uniprot.org/help/uniprotkb_column_names>`_.
+for more information about these features click `here <https://www.uniprot.org/help/uniprotkb_column_names>`_.
 
 
 -----
@@ -133,7 +137,7 @@
 
 **Data source (release date)**
 
-Annotations have been retrieved from UniProt.org (02/2019).
+Annotations have been retrieved from UniProt.org (release 02/2019).
 
 -----
 
@@ -141,13 +145,13 @@
 
 **Authors**
 
-David Christiany, Lisa Peru, T.P. Lien Nguyen, Florence Combes, Yves Vandenbrouck CEA, INSERM, CNRS, Grenoble-Alpes University, BIG Institute, FR
+David Christiany, Lisa Perus, T.P. Lien Nguyen, Florence Combes, Yves Vandenbrouck CEA, INSERM, CNRS, Grenoble-Alpes University, BIG Institute, FR
 
 Sandra Dérozier, Olivier Rué, Christophe Caron, Valentin Loux INRA, Paris-Saclay University, MAIAGE Unit, Migale Bioinformatics platform, FR
 
 This work has been partially funded through the French National Agency for Research (ANR) IFB project.
 
-Contact support@proteore.org for any questions or concerns about the Galaxy implementation of this tool.
+Help: contact@proteore.org for any questions or concerns about this tool.
  
     ]]></help>
     <citations>