# HG changeset patch # User proteore # Date 1561622498 14400 # Node ID 0679caefb2a327101f88b4d91ae24f59826c6b20 # Parent b9f57cba3172b329309cc23ba26ca76ecb022b4c planemo upload commit fb27a6b5de5cd7b269a41be3c85c593b77aa1b18-dirty diff -r b9f57cba3172 -r 0679caefb2a3 add_protein_features_mouse.xml --- a/add_protein_features_mouse.xml Tue May 14 09:47:13 2019 -0400 +++ b/add_protein_features_mouse.xml Thu Jun 27 04:01:38 2019 -0400 @@ -1,4 +1,4 @@ - + [UniProt] @@ -105,21 +105,25 @@ **Description** -This tool retrieves annotation (protein features) from the UniProt database (Mouse proteins) to enrich your protein IDs list. +This tool retrieves annotation (protein features) from the UniProt database (Mouse reference proteome) to enrich your protein IDs list. ----- **Input** -A list of Uniprot Accession Number (e.g. P05090) entered in a copy/paste mode or a file containing one or multiple columns with **at least one column of Uniprot accession number**. If your input file contains other type of IDs, please use the ID_Converter tool. +A list of UniProt Accession Number (e.g. P05090) entered in a copy/paste mode or a file containing one or multiple columns with **at least one column of Uniprot accession number**. If your input file contains other type of IDs, please use the ID_Converter tool. + +.. class:: warningmark + +In copy/paste mode, the number of UniProt AccNumber considered in input, is limited to 5000. ----- **Parameters** -"Select features": three categories of annotation can be retrieved: physico-chemical features, localisation (chromosome, subcellular) and disease information (set to "Yes" by default). Select each feature according to your interest by clicking the corresponding checkbox. +"Select features": Select each feature according to your interest by clicking the corresponding checkbox. -You can get more information about annotations `here `_. +for more information about these features click `here `_. ----- @@ -133,7 +137,7 @@ **Data source (release date)** -Annotations have been retrieved from UniProt.org (02/2019). +Annotations have been retrieved from UniProt.org (release 02/2019). ----- @@ -141,13 +145,13 @@ **Authors** -David Christiany, Lisa Peru, T.P. Lien Nguyen, Florence Combes, Yves Vandenbrouck CEA, INSERM, CNRS, Grenoble-Alpes University, BIG Institute, FR +David Christiany, Lisa Perus, T.P. Lien Nguyen, Florence Combes, Yves Vandenbrouck CEA, INSERM, CNRS, Grenoble-Alpes University, BIG Institute, FR Sandra Dérozier, Olivier Rué, Christophe Caron, Valentin Loux INRA, Paris-Saclay University, MAIAGE Unit, Migale Bioinformatics platform, FR This work has been partially funded through the French National Agency for Research (ANR) IFB project. -Contact support@proteore.org for any questions or concerns about the Galaxy implementation of this tool. +Help: contact@proteore.org for any questions or concerns about this tool. ]]>