Mercurial > repos > mvdbeek > yaha
comparison macros.xml @ 0:0c888a0686bb draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/yaha commit 15b31d03f0dbc59ec544d4ce5837ff03b6936c27-dirty
| author | mvdbeek |
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| date | Thu, 29 Dec 2016 14:51:49 -0500 |
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| -1:000000000000 | 0:0c888a0686bb |
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| 1 <?xml version="1.0"?> | |
| 2 <macros> | |
| 3 <xml name="index_parameter"> | |
| 4 <param argument="-H" name="maxHitsIndex" type="integer" value="65525" min="1" max="65525" label="maxHits" help="K-mers that appear > maxHits times in the genome will be randomly sampled down to max-hits locations. To take advantage of k-mer sampling, use the same value of maxHits during index creation and alignment."/> | |
| 5 <param argument="-L" name="wordLenIndex" type="integer" value="15" min="1" max="15" label="wordLen" help="the size of k-mers used for seed hits"/> | |
| 6 <param argument="-S" name="skipDistanceIndex" type="integer" value="1" min="1" max="15" label="Skip-distance" help="the distance to skip ahead in the genome before forming the next k-mer to index. Skip-distance must be between 1 and wordLen (inclusive)"> | |
| 7 </param> | |
| 8 </xml> | |
| 9 </macros> |