Mercurial > repos > mvdbeek > repeat_element_identifier

annotate repeat_element_identifier_tool.xml @ 2:862f0f5bfab7 draft

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planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
author mvdbeek
date Wed, 11 May 2016 13:23:48 -0400
parents b6eba97ffa0e
children 9b5d67bce66a
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f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
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1 <tool id="repeat_element_identifier" name="repeat_element_identifier" version="0.0.1" hidden="false" >
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
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2 <command>>
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
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3 #for i in $rep
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
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4 echo "$i.input_file.element_identifier" > "$output"
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
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5 #end for
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
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6 </command>
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
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7 <inputs>
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
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8 <repeat name="rep" title="input">
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862f0f5bfab7 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents: 1
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9 <param name="input_file" type="data"/>
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f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
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10 </repeat>
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b6eba97ffa0e planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents: 0
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11 </inputs>
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f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
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12 <outputs>
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
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13 <data name="output" />
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
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14 </outputs>
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
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15 <help>
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
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16 This tool will print the element identifier of files in a repeat section.
f62b463572f0 planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents:
diff changeset
17 </help>
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b6eba97ffa0e planemo upload for repository https://github.com/artbio/tools-artbio commit 3d96056b65a38e7642cfeef4ed274dc76b88472a-dirty
mvdbeek
parents: 0
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18 </tool>