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annotate tool_dependencies.xml @ 2:2d95eeda48a4 draft

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planemo upload for repository https://bitbucket.org/drosofff/gedtools/
author mvdbeek
date Fri, 14 Aug 2015 09:49:55 -0400
parents b71359e86b6b
children fc4bf31c255c
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="aspc" version="3.6.0.106805">
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4 <install version="1.0">
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5 <actions>
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6 <!-- <action type="download_by_url">http://download.asperasoft.com/download/sw/connect/3.6.0/AsperaConnectInstaller-3.6.0.106805.dmg</action> -->
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7 <action type="download_by_url">https://bitbucket.org/mvdbeek/galaxy_downloads/downloads/AsperaConnectInstaller-3.6.0.106805.dmg</action>
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8 <action type="shell_command">hdiutil attach -mountpoint install AsperaConnectInstaller-3.6.0.106805.dmg</action>
aa548b3949bc planemo upload for repository https://bitbucket.org/drosofff/gedtools/
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9 <action type="shell_command">pkgutil --expand install/AsperaConnectInstaller.pkg extract</action>
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10 <action type="shell_command">cat extract/AsperaConnect.pkg/Payload | gzip -d - | cpio -id</action>
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11 <action type="shell_command">hdiutil detach install</action>
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12 <action type="move_directory_files">
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13 <source_directory>Applications/Aspera\ Connect.app/Contents/Resources/</source_directory>
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14 <destination_directory>$INSTALL_DIR/bin</destination_directory>
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15 </action>
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16 <action type="set_environment">
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17 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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18 </action>
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19 </actions>
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20 </install>
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21 <readme>
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22 This tool dependency definition downloads and installs the aspera connect client, used for accelerating
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23 ncbi sra downloads.
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24 </readme>
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25 </package>
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26 </tool_dependency>