Mercurial > repos > kls286 > chap_test_20230328

annotate build/lib/CHAP/models/workflow.py @ 0:cbbe42422d56 draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline/tree/galaxy commit 1401a7e1ae007a6bda260d147f9b879e789b73e0-dirty
author kls286
date Tue, 28 Mar 2023 15:07:30 +0000
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cbbe42422d56 planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline/tree/galaxy commit 1401a7e1ae007a6bda260d147f9b879e789b73e0-dirty
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1 #!/usr/bin/env python
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2 #-*- coding: utf-8 -*-
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3 #pylint: disable=
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4 """
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5 File : workflow.py
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6 Author : Valentin Kuznetsov <vkuznet AT gmail dot com>
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7 Description: Workflow module
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8 """
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9
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10 # system modules
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11 from basemodel import BaseModel
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12
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13
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14 class Workflow(BaseModel):
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15 """
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16 Workflow docstring
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17 """
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18 def __init__(self, filename=None, **kwds):
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19 super().__init__(filename, **kwds)
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20 self.map['workflow'] = __name__
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21 print('create Workflow calls: ', end='')
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22
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24 class EDDWorkflow(Workflow):
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25 """
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26 EDDWorkflow
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27 """
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28 def __init__(self, filename=None, **kwds):
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29 super().__init__(filename, **kwds)
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30 self.map['workflow'] = 'edd'
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31 print('create EDDWorkflow')
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32
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33 class SAXWWorkflow(Workflow):
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34 """
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35 SAXWWorkflow
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36 """
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kls286
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37 def __init__(self, filename=None, **kwds):
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38 super().__init__(filename, **kwds)
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39 self.map['workflow'] = 'saxw'
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40 print('create SAXWWorkflow')
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41
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42 if __name__ == '__main__':
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43 print('--- create EDDWorkflow from config')
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44 wflow = EDDWorkflow()
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45 print('map', wflow.map)
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46 print('--- create SAXWWorkflow from file.txt')
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47 wflow = SAXWWorkflow('file.txt')
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48 print('map', wflow.map)