Mercurial > repos > jowong > prince_galaxy
view filler.py @ 0:88748989a22a draft default tip
planemo upload
author | jowong |
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date | Tue, 13 Nov 2018 11:41:37 -0500 |
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#!/usr/bin/env python import sys import argparse as ap parser = ap.ArgumentParser(prog='filler', conflict_handler='resolve', description="produce filler collection to deal with galaxy handling") input = parser.add_argument_group('Input', '') input.add_argument('-i', '--input', nargs=1, required=True, help="Paths to (forward) reads") input.add_argument('-o', '--output', nargs=1, required=True, help="output") if len(sys.argv) == 0: parser.print_usage() sys.exit(1) args = parser.parse_args() output = open(args.output[0], 'w') output.write(args.input[0]) output.write("\n")