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changeset 6:a3d60df650b7 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit 46636ba3d63d34e9ee30a2e0ee28cca0213628c8
author iuc
date Wed, 25 May 2016 15:04:27 -0400
parents dfe891be734c
children c6bebb3b3962
files abundance_estimates_to_matrix.xml align_and_estimate_abundance.xml run_DE_analysis.xml samples_qccheck.xml tool_dependencies.xml trinity.xml
diffstat 6 files changed, 6 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/abundance_estimates_to_matrix.xml	Thu May 12 06:43:34 2016 -0400
+++ b/abundance_estimates_to_matrix.xml	Wed May 25 15:04:27 2016 -0400
@@ -200,7 +200,7 @@
     </help>
 
      <citations>
-        <citation type="doi">doi:10.1038/nbt.1883</citation>
+        <citation type="doi">10.1038/nbt.1883</citation>
     </citations>
 </tool>
 
--- a/align_and_estimate_abundance.xml	Thu May 12 06:43:34 2016 -0400
+++ b/align_and_estimate_abundance.xml	Wed May 25 15:04:27 2016 -0400
@@ -254,7 +254,7 @@
     </help>
 
      <citations>
-        <citation type="doi">doi:10.1038/nbt.1883</citation>
+        <citation type="doi">10.1038/nbt.1883</citation>
     </citations>
 </tool>
 
--- a/run_DE_analysis.xml	Thu May 12 06:43:34 2016 -0400
+++ b/run_DE_analysis.xml	Wed May 25 15:04:27 2016 -0400
@@ -140,7 +140,7 @@
     </help>
 
      <citations>
-        <citation type="doi">doi:10.1038/nbt.1883</citation>
+        <citation type="doi">10.1038/nbt.1883</citation>
     </citations>
 </tool>
 
--- a/samples_qccheck.xml	Thu May 12 06:43:34 2016 -0400
+++ b/samples_qccheck.xml	Wed May 25 15:04:27 2016 -0400
@@ -108,7 +108,7 @@
     </help>
     
      <citations>
-        <citation type="doi">doi:10.1038/nbt.1883</citation>
+        <citation type="doi">10.1038/nbt.1883</citation>
     </citations>
 </tool>
 
--- a/tool_dependencies.xml	Thu May 12 06:43:34 2016 -0400
+++ b/tool_dependencies.xml	Wed May 25 15:04:27 2016 -0400
@@ -25,7 +25,7 @@
         <repository changeset_revision="4ae6642b634f" name="package_r_limma_3_28_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="deseq2" version="1.10.0">
-       <repository changeset_revision="b771de3e4f63" name="package_deseq2_1_10_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+       <repository changeset_revision="5d9def29ff0b" name="package_deseq2_1_10_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <set_environment version="1.0">
         <environment_variable action="set_to" name="TRINITY_MEM_OPTIONS">--max_memory 30G --bflyHeapSpaceMax 30G</environment_variable>
--- a/trinity.xml	Thu May 12 06:43:34 2016 -0400
+++ b/trinity.xml	Wed May 25 15:04:27 2016 -0400
@@ -162,7 +162,7 @@
     </help>
 
      <citations>
-        <citation type="doi">doi:10.1038/nbt.1883</citation>
+        <citation type="doi">10.1038/nbt.1883</citation>
     </citations>
 </tool>