Mercurial > repos > iuc > suite_mothur

changeset 3:2f19b368cafd draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 721531d2e9fd1e208a3fba8cfbe5dcd572599ca2
author iuc
date Tue, 05 Sep 2017 16:49:02 -0400
parents b515a6a5801f
children 300476327947
files repository_dependencies.xml
diffstat 1 files changed, 126 insertions(+), 126 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Thu Jun 08 16:03:38 2017 -0400
+++ b/repository_dependencies.xml	Tue Sep 05 16:49:02 2017 -0400
@@ -1,128 +1,128 @@
 <?xml version="1.0"?>
-<repositories description="A suite of tools designed to bring the mothur project into Galaxy.">  <repository changeset_revision="844a4a7c3782" name="mothur_lefse" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b18cfd3a14a6" name="mothur_chimera_perseus" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a16c10c1c418" name="mothur_tree_shared" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0bb0ddd83eff" name="mothur_collect_shared" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="fb0eb9393fa8" name="mothur_consensus_seqs" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="f1c8a12f90be" name="mothur_make_lookup" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b741add68934" name="mothur_chimera_uchime" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="c6461f53ded3" name="mothur_bin_seqs" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="48c4a9ef85e6" name="mothur_shhh_seqs" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="cb4e005b8e8d" name="mothur_count_seqs" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="9f28030ac5c5" name="mothur_get_dists" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="c212b5d35bfe" name="mothur_cluster" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="1cf5a6a5eb05" name="mothur_make_group" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="7e334883931c" name="mothur_degap_seqs" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0de60716c635" name="mothur_get_lineage" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="6c8a25657db2" name="mothur_metastats" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="3e6a5012b639" name="mothur_collect_single" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b0f422397f42" name="mothur_chop_seqs" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="c51b7f1f7972" name="mothur_classify_tree" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="525400c8be71" name="mothur_primer_design" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="4f5ecd0c94b3" name="mothur_phylotype" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="61b2c4a74b35" name="mothur_make_fastq" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b6f8dacd95cb" name="mothur_remove_otus" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a83120484b45" name="mothur_shhh_flows" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="08136b194843" name="mothur_remove_dists" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="dfbcf186c775" name="mothur_amova" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="c0deb61bbd3c" name="mothur_summary_tax" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="897ba33ecbdb" name="mothur_filter_shared" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="033b821e30e1" name="mothur_parse_list" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="c927518943fc" name="mothur_get_communitytype" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="840ac4688cf5" name="mothur_make_design" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="32a19ce534d1" name="mothur_sffinfo" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="72f9b9aca28d" name="mothur_cooccurrence" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="9bdf0bca01c3" name="mothur_rarefaction_shared" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a92e6daa48d6" name="mothur_summary_single" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="08692ab7170c" name="mothur_trim_seqs" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="4c752399b0c7" name="mothur_heatmap_sim" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="55a2429c5407" name="mothur_heatmap_bin" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="50874b7ffc15" name="mothur_remove_otulabels" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="054074503e50" name="mothur_trim_flows" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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-  <repository changeset_revision="3e8a2864059a" name="mothur_get_otulist" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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-  <repository changeset_revision="00df9f248874" name="mothur_normalize_shared" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="eedf2aef456a" name="mothur_clearcut" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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-  <repository changeset_revision="f8dbdd8fb4bf" name="mothur_cluster_classic" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="8e771931d548" name="mothur_merge_groups" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="4f382764768a" name="mothur_pairwise_seqs" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="6352c9aa5116" name="mothur_remove_rare" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="87747f00c377" name="mothur_remove_seqs" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="99da0c9c070c" name="mothur_merge_taxsummary" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="2af26863e7ca" name="mothur_nmds" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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-  <repository changeset_revision="122c47c8dad6" name="mothur_create_database" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="17b63c3cc04d" name="mothur_get_oturep" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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-  <repository changeset_revision="583954d9f36e" name="mothur_get_group" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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-  <repository changeset_revision="2de7963eb3ba" name="mothur_make_contigs" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="ad97e20535c7" name="mothur_chimera_bellerophon" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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-  <repository changeset_revision="01f7becdf418" name="mothur_parsimony" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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-  <repository changeset_revision="0eae3db4c7a5" name="mothur_make_biom" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+<repositories description="A suite of tools designed to bring the mothur project into Galaxy.">  <repository changeset_revision="90dd909d4bc5" name="mothur_create_database" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="aaeb8f2dcc7f" name="mothur_shhh_flows" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="5a23bee92151" name="mothur_homova" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="419044fa4f0c" name="mothur_mimarks_attributes" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="46392283eb59" name="mothur_merge_taxsummary" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a5e02397196f" name="mothur_pca" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="7c6fd799d0e7" name="mothur_amova" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="2b445516aed1" name="mothur_unifrac_unweighted" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="40561fdfb8d3" name="mothur_get_groups" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="7ba13fa642c5" name="mothur_classify_rf" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="248a0277c324" name="mothur_classify_otu" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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