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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/plasmidfinder commit 232de7b04558cf28e2caffb8a5e0520b7dd1b645
author iuc
date Tue, 10 Feb 2026 17:52:55 +0000
parents f52df366f012
children
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{'plasmidfinder': {'results': {'Gram Positive': {'Inc18': {'rep14a_2_ORF1(pKQ10)_EFU01917': {'HSP_length': 402,
                                                                                             'accession': 'EFU01917',
                                                                                             'contig_name': 'NA',
                                                                                             'coverage': 100.0,
                                                                                             'hit_id': 'rep14a_2_ORF1(pKQ10)_EFU01917',
                                                                                             'identity': 99.5,
                                                                                             'note': 'ORF1(pKQ10)',
                                                                                             'plasmid': 'rep14a',
                                                                                             'position_in_ref': '1..403',
                                                                                             'positions_in_contig': 'NA..NA',
                                                                                             'template_length': 402}},
                                                 'Rep3': 'No hit found',
                                                 'Rep_trans': {'rep14a_2_ORF1(pKQ10)_EFU01917': {'HSP_length': 402,
                                                                                                 'accession': 'EFU01917',
                                                                                                 'contig_name': 'NA',
                                                                                                 'coverage': 100.0,
                                                                                                 'hit_id': 'rep14a_2_ORF1(pKQ10)_EFU01917',
                                                                                                 'identity': 99.5,
                                                                                                 'note': 'ORF1(pKQ10)',
                                                                                                 'plasmid': 'rep14a',
                                                                                                 'position_in_ref': '1..403',
                                                                                                 'positions_in_contig': 'NA..NA',
                                                                                                 'template_length': 402}}}},
                   'run_info': {'date': '10.02.2026', 'time': '15:20:44'},
                   'user_input': {'file_format': 'fastq',
                                  'filename(s)': ['/tmp/tmp1yi7ks0w/files/0/e/3/dataset_0e36e86f-0bbd-4a32-940e-8e30997c8d02.dat'],
                                  'method': 'kma'}}}