annotate tool_dependencies.xml @ 0:3d29ab6f1146 draft

Uploaded
author iuc
date Thu, 13 Nov 2014 11:50:13 -0500
parents
children 802f5b87ab91
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
1 <?xml version="1.0"?>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
2 <tool_dependency>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
3 <package name="libxml2" version="2.9.1">
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
4 <repository changeset_revision="926b471a2e43" name="package_libxml2_2_9_1" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
5 </package>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
6 <package name="libxslt" version="1.1.28">
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
7 <repository changeset_revision="a8d63d4be58f" name="package_libxslt_1_1_28" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
8 </package>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
9 <package name="perl" version="5.18.1">
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
10 <repository changeset_revision="a1a111b9faa5" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
11 </package>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
12 <package name="graphicsmagick" version="1.3.18">
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
13 <repository changeset_revision="2fd4eb971ba5" name="package_graphicsmagick_1_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
14 </package>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
15 <package name="meme" version="4.10.0">
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
16 <install version="1.0">
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
17 <actions>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
18
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
19 <action type="download_by_url">http://ebi.edu.au/ftp/software/MEME/4.10.0/meme_4.10.0_1.tar.gz</action>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
20 <action type="setup_perl_environment">
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
21 <repository changeset_revision="a1a111b9faa5" name="package_perl_5_18" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
22 <package name="perl" version="5.18.1" />
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
23 </repository>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
24 <!-- allow downloading and installing an Perl package from cpan.org-->
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
25 <package>http://search.cpan.org/CPAN/authors/id/P/PE/PETDANCE/HTML-Tagset-3.20.tar.gz</package>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
26 <package>http://search.cpan.org/CPAN/authors/id/G/GA/GAAS/HTML-Parser-3.71.tar.gz</package>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
27 <package>http://search.cpan.org/CPAN/authors/id/W/WO/WONKO/HTML-Template-2.95.tar.gz</package>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
28 </action>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
29
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
30 <action type="set_environment_for_install">
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
31 <repository changeset_revision="926b471a2e43" name="package_libxml2_2_9_1" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu">
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
32 <package name="libxml2" version="2.9.1" />
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
33 </repository>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
34 <repository changeset_revision="a8d63d4be58f" name="package_libxslt_1_1_28" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu">
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
35 <package name="libxslt" version="1.1.28" />
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
36 </repository>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
37 </action>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
38
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
39 <action type="autoconf">--with-url=http://meme.nbcr.net/meme</action>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
40 <action type="set_environment">
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
41 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
42 <environment_variable action="set_to" name="MEME_ROOT_DIR">$INSTALL_DIR</environment_variable>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
43 </action>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
44 </actions>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
45 </install>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
46 <readme>Motif-based sequence analysis tools. http://meme.nbcr.net</readme>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
47 </package>
3d29ab6f1146 Uploaded
iuc
parents:
diff changeset
48 </tool_dependency>