|
0
|
1 <?xml version="1.0"?>
|
|
|
2 <tool_dependency>
|
|
|
3 <package name="libxml2" version="2.9.1">
|
|
|
4 <repository changeset_revision="926b471a2e43" name="package_libxml2_2_9_1" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
|
|
|
5 </package>
|
|
|
6 <package name="libxslt" version="1.1.28">
|
|
|
7 <repository changeset_revision="a8d63d4be58f" name="package_libxslt_1_1_28" owner="devteam" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
|
|
|
8 </package>
|
|
|
9 <package name="perl" version="5.18.1">
|
|
|
10 <repository changeset_revision="a1a111b9faa5" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
|
|
|
11 </package>
|
|
|
12 <package name="graphicsmagick" version="1.3.18">
|
|
|
13 <repository changeset_revision="2fd4eb971ba5" name="package_graphicsmagick_1_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
|
|
|
14 </package>
|
|
|
15 <package name="meme" version="4.10.0">
|
|
|
16 <install version="1.0">
|
|
|
17 <actions>
|
|
|
18
|
|
|
19 <action type="download_by_url">http://ebi.edu.au/ftp/software/MEME/4.10.0/meme_4.10.0_1.tar.gz</action>
|
|
|
20 <action type="setup_perl_environment">
|
|
|
21 <repository changeset_revision="a1a111b9faa5" name="package_perl_5_18" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
|
|
|
22 <package name="perl" version="5.18.1" />
|
|
|
23 </repository>
|
|
|
24 <!-- allow downloading and installing an Perl package from cpan.org-->
|
|
|
25 <package>http://search.cpan.org/CPAN/authors/id/P/PE/PETDANCE/HTML-Tagset-3.20.tar.gz</package>
|
|
|
26 <package>http://search.cpan.org/CPAN/authors/id/G/GA/GAAS/HTML-Parser-3.71.tar.gz</package>
|
|
|
27 <package>http://search.cpan.org/CPAN/authors/id/W/WO/WONKO/HTML-Template-2.95.tar.gz</package>
|
|
|
28 </action>
|
|
|
29
|
|
|
30 <action type="set_environment_for_install">
|
|
|
31 <repository changeset_revision="926b471a2e43" name="package_libxml2_2_9_1" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu">
|
|
|
32 <package name="libxml2" version="2.9.1" />
|
|
|
33 </repository>
|
|
|
34 <repository changeset_revision="a8d63d4be58f" name="package_libxslt_1_1_28" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu">
|
|
|
35 <package name="libxslt" version="1.1.28" />
|
|
|
36 </repository>
|
|
|
37 </action>
|
|
|
38
|
|
|
39 <action type="autoconf">--with-url=http://meme.nbcr.net/meme</action>
|
|
|
40 <action type="set_environment">
|
|
|
41 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
|
|
|
42 <environment_variable action="set_to" name="MEME_ROOT_DIR">$INSTALL_DIR</environment_variable>
|
|
|
43 </action>
|
|
|
44 </actions>
|
|
|
45 </install>
|
|
|
46 <readme>Motif-based sequence analysis tools. http://meme.nbcr.net</readme>
|
|
|
47 </package>
|
|
|
48 </tool_dependency>
|