Mercurial > repos > iuc > package_gmap_2016_09_23
annotate tool_dependencies.xml @ 2:8e8be119bda7 draft default tip
Fix URL
| author | iuc |
|---|---|
| date | Tue, 25 Oct 2016 09:10:19 -0400 |
| parents | cddc18d238f7 |
| children |
| rev | line source |
|---|---|
|
0
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
1 <?xml version="1.0"?> |
|
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
2 <tool_dependency> |
| 1 | 3 <package name="gmap" version="2016.09.23"> |
|
0
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
4 <install version="1.0"> |
|
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
5 <actions> |
| 2 | 6 <action type="download_by_url" target_filename="gmap-2016-09-23.tar.gz" sha256sum="dbb99cab7ee675bdc79d6773d7537b197812e73151c5dafa1fbc8f9c0c58ef93">http://research-pub.gene.com/gmap/src/gmap-gsnap-2016-09-23.tar.gz</action> |
|
0
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
7 <action type="shell_command"> ./configure --prefix=$INSTALL_DIR --with-gmapdb=$INSTALL_DIR/gmapdb</action> |
|
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
8 <action type="shell_command">make</action> |
|
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
9 <action type="shell_command">make install</action> |
|
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
10 <action type="set_environment"> |
|
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> |
|
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
12 </action> |
|
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
13 </actions> |
|
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
14 </install> |
|
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
15 <readme> |
|
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
16 </readme> |
|
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
17 </package> |
|
78dcc4213e07
Uploaded initial version, based on JJ's package_gmap_2013_05_09
iuc
parents:
diff
changeset
|
18 </tool_dependency> |
