Mercurial > repos > iuc > package_gmap_2016_09_23

comparison tool_dependencies.xml @ 2:8e8be119bda7 draft default tip

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Fix URL
author iuc
date Tue, 25 Oct 2016 09:10:19 -0400
parents cddc18d238f7
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1:cddc18d238f7 2:8e8be119bda7
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="gmap" version="2016.09.23"> 3 <package name="gmap" version="2016.09.23">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="download_by_url" target_filename="gmap-2016-09-23.tar.gz" sha256sum="dbb99cab7ee675bdc79d6773d7537b197812e73151c5dafa1fbc8f9c0c58ef93">http://research-pub.gene.com/gmap/src/gmap-gsnap-2016.09.23.tar.gz</action> 6 <action type="download_by_url" target_filename="gmap-2016-09-23.tar.gz" sha256sum="dbb99cab7ee675bdc79d6773d7537b197812e73151c5dafa1fbc8f9c0c58ef93">http://research-pub.gene.com/gmap/src/gmap-gsnap-2016-09-23.tar.gz</action>
7 <action type="shell_command"> ./configure --prefix=$INSTALL_DIR --with-gmapdb=$INSTALL_DIR/gmapdb</action> 7 <action type="shell_command"> ./configure --prefix=$INSTALL_DIR --with-gmapdb=$INSTALL_DIR/gmapdb</action>
8 <action type="shell_command">make</action> 8 <action type="shell_command">make</action>
9 <action type="shell_command">make install</action> 9 <action type="shell_command">make install</action>
10 <action type="set_environment"> 10 <action type="set_environment">
11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> 11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>