Mercurial > repos > iuc > package_blast_plus_2_2_26

comparison tool_dependencies.xml @ 0:733eee977fb8 draft

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Uploaded tool_dependency.xml previously bundled with ncbi_blast_plus repository. Note this is known to fail to compile with recent BOOST libraries.
author peterjc
date Wed, 07 Aug 2013 11:34:47 -0400
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children 9ff9bfdcd04f
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-1:000000000000 0:733eee977fb8
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="blast+" version="2.2.26+">
4 <install version="1.0">
5 <actions>
6 <action type="download_by_url">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-src.tar.gz</action>
7 <action type="shell_command">cd c++ &amp;&amp; ./configure --prefix=$INSTALL_DIR &amp;&amp; make &amp;&amp; make install</action>
8 <action type="set_environment">
9 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
10 </action>
11 </actions>
12 </install>
13 <readme>
14 Downloads and compiles BLAST+ from the NCBI, which assumes you have
15 all the required build dependencies installed. See:
16 http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&amp;PAGE_TYPE=BlastDocs&amp;DOC_TYPE=Download
17 </readme>
18 </package>
19 </tool_dependency>
20