Mercurial > repos > iuc > funannotate_annotate

diff funannotate_annotate.xml @ 6:c8eccad1b953 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 2c4f8172c3f452e1119b3d528c97da382750adeb
author iuc
date Tue, 25 Apr 2023 18:24:17 +0000
parents cb06fd12e746
children f6482e570d32
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line diff
--- a/funannotate_annotate.xml	Thu Apr 13 17:07:59 2023 +0000
+++ b/funannotate_annotate.xml	Tue Apr 25 18:24:17 2023 +0000
@@ -8,6 +8,12 @@
     </requirements>
     <version_command>funannotate check --show-versions</version_command>
     <command><![CDATA[
+## Needed by some subprocess invoked internally
+## https://github.com/nextgenusfs/funannotate/issues/905
+export FUNANNOTATE_DB='$database.fields.path'
+
+&&
+
 funannotate annotate
 
 #if $input.input_type == 'gbk'