Mercurial > repos > iuc > funannotate_annotate

changeset 6:c8eccad1b953 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 2c4f8172c3f452e1119b3d528c97da382750adeb
author iuc
date Tue, 25 Apr 2023 18:24:17 +0000
parents 9474ef36a87b
children f6482e570d32
files funannotate_annotate.xml macros.xml
diffstat 2 files changed, 7 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/funannotate_annotate.xml	Thu Apr 13 17:07:59 2023 +0000
+++ b/funannotate_annotate.xml	Tue Apr 25 18:24:17 2023 +0000
@@ -8,6 +8,12 @@
     </requirements>
     <version_command>funannotate check --show-versions</version_command>
     <command><![CDATA[
+## Needed by some subprocess invoked internally
+## https://github.com/nextgenusfs/funannotate/issues/905
+export FUNANNOTATE_DB='$database.fields.path'
+
+&&
+
 funannotate annotate
 
 #if $input.input_type == 'gbk'
--- a/macros.xml	Thu Apr 13 17:07:59 2023 +0000
+++ b/macros.xml	Tue Apr 25 18:24:17 2023 +0000
@@ -1,7 +1,7 @@
 <?xml version="1.0"?>
 <macros>
     <token name="@TOOL_VERSION@">1.8.15</token>
-    <token name="@VERSION_SUFFIX@">0</token>
+    <token name="@VERSION_SUFFIX@">1</token>
 
     <xml name="requirements">
         <requirement type="package" version="@TOOL_VERSION@">funannotate</requirement>