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annotate boxplot.r @ 1:bfaa7f89c98d draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 4494db13b69987fbc97d47177d2a5956e46e927b"
author iuc
date Wed, 17 Nov 2021 09:06:29 +0000
parents b457cf9d24d7
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b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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1 wrapper <- function(table, columns, options) {
b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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3 # initialize output list
b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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4 l <- list()
b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
diff changeset
6 # loop through all columns
b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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7 for (key in names(columns)) {
b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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8 # load column data
b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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9 column <- as.numeric(columns[key])
b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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10 column_data <- suppressWarnings(as.numeric(as.character(table[column][[1]])))
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bfaa7f89c98d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 4494db13b69987fbc97d47177d2a5956e46e927b"
iuc
parents: 0
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b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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12 # create hist data
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bfaa7f89c98d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 4494db13b69987fbc97d47177d2a5956e46e927b"
iuc
parents: 0
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13 data <- boxplot(column_data, plot = FALSE)
bfaa7f89c98d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 4494db13b69987fbc97d47177d2a5956e46e927b"
iuc
parents: 0
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b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
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15 # collect vectors in list
b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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16 l <- append(l, list(data$stats))
b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
parents:
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17 }
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bfaa7f89c98d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 4494db13b69987fbc97d47177d2a5956e46e927b"
iuc
parents: 0
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b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
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19 # return
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bfaa7f89c98d "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 4494db13b69987fbc97d47177d2a5956e46e927b"
iuc
parents: 0
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20 return(l)
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b457cf9d24d7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/charts/ commit 87080d49913cfd40a77eda7e5834ac9c4bc30b0b
iuc
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21 }