Mercurial > repos > greg > ideas

changeset 172:473a089c5fb6 draft

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Uploaded
author greg
date Thu, 25 Jan 2018 09:48:20 -0500
parents 445f67ea18f6
children 843bfa2dff2c
files ideas.xml
diffstat 1 files changed, 10 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/ideas.xml	Thu Jan 25 09:43:42 2018 -0500
+++ b/ideas.xml	Thu Jan 25 09:48:20 2018 -0500
@@ -15,6 +15,16 @@
 #set output_training_dir = "output_training_dir"
 #set windows_positions_by_chroms_config = "windows_positions_by_chroms_config.txt"
 #set perform_training = $perform_training_cond.perform_training
+#if str($output_heatmaps) == "yes":
+    mkdir '$output_pdf_dir' &&
+#end if
+#if str($perform_training) == "yes":
+    #set output_dir = $output_training_dir
+    mkdir '$output_training_dir' &&
+#else:
+    #set output_dir = $output_txt_dir
+    mkdir '$output_txt_dir' &&
+#end if
 && Rscript '$__tool_directory__/ideas.R'
 --burnin_num $burnin_num
 #if str($bychr) == "true":