Mercurial > repos > greg > gene_family_phylogeny_builder
changeset 52:3adaaeb651c0 draft
Uploaded
author | greg |
---|---|
date | Mon, 09 Oct 2017 08:58:39 -0400 |
parents | 9962341547d3 |
children | 24774c743d31 |
files | gene_family_phylogeny_builder.xml |
diffstat | 1 files changed, 0 insertions(+), 1 deletions(-) [+] |
line wrap: on
line diff
--- a/gene_family_phylogeny_builder.xml Thu Oct 05 14:23:17 2017 -0400 +++ b/gene_family_phylogeny_builder.xml Mon Oct 09 08:58:39 2017 -0400 @@ -101,7 +101,6 @@ * **Bootstrap replicates** - number of bootstrap replicates for RAxML to conduct a rapid bootstrap analysis and search for the best-scoring ML tree (default = 100). * **Maximum orthogroup size** - maximum number of sequences allowed in orthogroup alignments (default = 100). * **Minimum orthogroup size** - minimum number of sequences allowed in orthogroup alignments (default = 4). - * **Output additional directory of phylogenetic tree files** - selecting 'Yes' will produce an additional output that has an associated directory of files that are copies of the elements of the phylogenetic trees output dataset collection (this output will be used for future downstream tools). .. _repository: https://github.com/dePamphilis/PlantTribes/tree/master/config