Mercurial > repos > greg > gene_family_classifier

changeset 60:2a9396e4fdbe draft

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Uploaded
author greg
date Thu, 09 Feb 2017 10:46:29 -0500
parents 46ed7233db21
children 43d6e752f181
files gene_family_classifier.xml
diffstat 1 files changed, 8 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/gene_family_classifier.xml	Thu Feb 09 10:33:47 2017 -0500
+++ b/gene_family_classifier.xml	Thu Feb 09 10:46:29 2017 -0500
@@ -106,7 +106,10 @@
             #end if
 
             #if $create_ortho_sequences:
-                #while not $os.path.exists($orthogroups_fasta_src_dir):
+                #while True:
+                    #if $os.path.exists($orthogroups_fasta_src_dir):
+                        #break
+                    #end if
                     $time.sleep(5)
                 #end while
                 #if len($os.listdir($orthogroups_fasta_src_dir)) > 0:
@@ -121,7 +124,10 @@
 
             #if $single_copy_orthogroup:
                 #if $create_ortho_sequences:
-                    #while not $os.path.exists($single_copy_fasta_src_dir):
+                    #while True:
+                        #if $os.path.exists($single_copy_fasta_src_dir):
+                            #break
+                        #end if
                         $time.sleep(5)
                     #end while
                     #if len($os.listdir($single_copy_fasta_src_dir)) > 0: