Mercurial > repos > greg > gene_family_aligner

changeset 39:0e7ad3fa851e draft

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Uploaded
author greg
date Tue, 01 Aug 2017 11:43:49 -0400
parents bfac5c2309ca
children 72f519a8e79a
files gene_family_aligner.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/gene_family_aligner.xml	Tue Aug 01 10:36:06 2017 -0400
+++ b/gene_family_aligner.xml	Tue Aug 01 11:43:49 2017 -0400
@@ -131,7 +131,7 @@
             <filter>(input_format_cond['input_format'] == 'ptortho' or (input_format_cond['input_format'] == 'ptorthocs' and input_format_cond['codon_alignments'] == 'yes')) and (remove_gappy_sequences_cond['remove_gappy_sequences'] == 'yes' and remove_gappy_sequences_cond['remove_sequences_with_gaps_cond']['remove_sequences_with_gaps'] == 'no')</filter>
         </data>
         <collection name="dataset_collection" type="list" label="${tool.name} (dataset collection) on ${on_string}">
-            <discover_datasets pattern="__name__" directory="geneFamilyAlignments_dir/dataset_collection" format="fasta" />
+            <discover_datasets pattern="__name__" directory="dataset_collection" format="fasta" />
             <filter>output_dataset_collection_cond['output_dataset_collection'] == 'yes'</filter>
         </collection>
     </outputs>