Mercurial > repos > greg > gene_family_aligner

annotate test-data/39614.fna @ 64:8d71c1dff476 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author greg
date Mon, 30 Oct 2017 08:56:01 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
64
8d71c1dff476 Uploaded
greg
parents:
diff changeset
1 >gnl_Orysa6.0_PACid_16878968
8d71c1dff476 Uploaded
greg
parents:
diff changeset
2 ATGTCACATATGGAAGCCTTCCAAAATGTTGTGCTCCTGCATAAAGCAAATTCAAATTCTACACTAGAGGATATATCATC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
3 CCTATCTGCTGCAAGCTGTTGCAGCCTTGATCAGCTTCTAGCTTGTGTCGAGGGAGAGGCACAGAAGATATTTGGTGATA
8d71c1dff476 Uploaded
greg
parents:
diff changeset
4 TCCAGAATTTGCTAGCTGATCATCGAAGCGAAGTGGCACATTTCACTCAAGAGTTGCGGGAGAGTTTCCGCATTAGCTTG
8d71c1dff476 Uploaded
greg
parents:
diff changeset
5 GATAGGACGAAGGACATGTCTAGTTTCATCCTTGGGTTGTTCGATAAGTATGTGGAGGAAACTTCGAAGTTGCAGAGCCA
8d71c1dff476 Uploaded
greg
parents:
diff changeset
6 CTCCAATCACACACATGAAGCACAAGTCAAAAGCCTTGAAGATTTCCAGAAGGCTTATGAGGAGCAATCAAAATCAGAAG
8d71c1dff476 Uploaded
greg
parents:
diff changeset
7 AACAAAAGCTTCTGGCGGACATCACCAGTTTGGTTTCTAAACACGTTACTCGACAACGAGAACTGGTGGGTGGTAGACTA
8d71c1dff476 Uploaded
greg
parents:
diff changeset
8 AACTCTCTTGGTGACGCCGCTCGTGGAAACAAAGCATTTTTGGATGAGCACACGTCCGCCATGGAGGTGGTCACGAAGGA
8d71c1dff476 Uploaded
greg
parents:
diff changeset
9 CGCCAAGAGAAAGTGGGAAATGTTTGCAGAGCAGGCAGAGAATGACTGCAAAGTTGGGTCCAACTTCTCTGCAGCTAAGC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
10 ATTGTCGCATGGAAACCATTCTGCAGGAATGTGCATGCACCGTCGACACTGCTGCTCAACAATGGAAAGCATCACATGCA
8d71c1dff476 Uploaded
greg
parents:
diff changeset
11 ACTGTTAACGATCTATGCAGAAAACAAATAGCTGAAGTTGAAGCACTCGTCAGGAGTGCAATCGAAACCAACGAGCAGCA
8d71c1dff476 Uploaded
greg
parents:
diff changeset
12 CGAAGCAGAGATTGCATCTTCCCGTGCCACGGCCGAGGAGCATGCGTCCAACAGCAGCAAGGACCTACTCCAAGATGTTG
8d71c1dff476 Uploaded
greg
parents:
diff changeset
13 ACAATATGCTGCAGGAGGCGCGCAATTCGTCGTCGAGAGTGGTGTCGACGGTGGAAGCTCATTTGGGAGAGAGCCAGCAT
8d71c1dff476 Uploaded
greg
parents:
diff changeset
14 CTACAGGAGAGCCACTCCAGCCATACCGCCGGCATCAACACCCACGCCGACAACGCTTTCCAGAGCAGCTACAAGGACTA
8d71c1dff476 Uploaded
greg
parents:
diff changeset
15 CGAGCCGACCGGCGAAACTCCGGTGAGGTCGGAGCCGGAGGTGCCGAGCAAAGACGCGATCGAGTCGCTGCGAGCGATGC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
16 CGATGGAGTCCCTGATGGACGAGTTCCGCGAGAACCACCCCTACGAGCCGAGCAAGGACCGCAGGCCATCGCTCATCCCT
8d71c1dff476 Uploaded
greg
parents:
diff changeset
17 CGCTCGCCGCTCGCCACCATCAACAAC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
18 >gnl_Phoda3.0_PDK_30s1023721g001
8d71c1dff476 Uploaded
greg
parents:
diff changeset
19 GTAAACCAAAAAATGATGAAATGTACATTAATCAAAGATCTCTATGGAGAAATTGAGCGTCTAAAAGCAGAGGTGTATGC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
20 TGCTCGTGAGAAAGTTGGAGTTTACATACCAAAAGAACGCTACCATCAAGAAGAGAGCGAACGGAAGGCAATGGCAGAAC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
21 AAATTGAACAAATGGGGGTCTTGCTCGAAAACAATCAAAAGCAAATTGAGGATCTACAAGAAAGGTATAATACTCAACTT
8d71c1dff476 Uploaded
greg
parents:
diff changeset
22 CAACAGTCTGATGACCTGAGCAAAAAGCTTGATGCCACCGAGATTCTCTGTGTTTCTCTGAGCAAAAAGCTTGATGCCAC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
23 CGAGAAAAGTTTGGAGCACACTAGCAAGTTATTGGCTGCTGCCAGAGAAGATCTGAAGCAAGCTCAGTATACTCTGAAGG
8d71c1dff476 Uploaded
greg
parents:
diff changeset
24 AGAAAGATTTTGTTATATCAGAGCAGAGGAAAGCAGCTAGAGAAGACAAACTGAATACTGCCAACAGATCTATTGTGAAC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
25 AATTTTCGGGCTGATCTTGCAACAAGGGTTGGAACACTTTGTAATACTGTTGTTGCATCCTTGGATCGGCAAAATGAACA
8d71c1dff476 Uploaded
greg
parents:
diff changeset
26 CCTTCAGTCTGTTGAGAAACTATGTCAATCTAGCCTTGATTTCCATGACAAGGCAGTATCAGAGCTGAAAAGGAAAGTGT
8d71c1dff476 Uploaded
greg
parents:
diff changeset
27 CAGCTTCAAGAGCTTTGTATACTTCCCATATGGAAGCACTACAAAATGTAGTGCGTTTGCATAAGGCAAGCAGCAATGCC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
28 AGCTTAGAAGAGATGTCATCCATGATTTCTGCCAATACCTGCTCTCTTGATCAGTTACTTGCCTTGGGGCAAAGCGAAGC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
29 AGATCTGATTTTTAGTGATCTGCAAAGCATATTGTCAATTCACCGAGGAGAGATTGCAAATTTCACCCGTGAACTTCGTG
8d71c1dff476 Uploaded
greg
parents:
diff changeset
30 AGAAATTTCAAGTTAATTTGGATCGGACAAAGGAGATGTCCAATTTTATTCTTGAGCTGCTTGAAAAGATAGGGAAGGGA
8d71c1dff476 Uploaded
greg
parents:
diff changeset
31 ACAAAAGAATTTCAGAATGACTCAACTTTGGTACATGAGGCTCAGGTGAAGAGCATTGGTGATTTCCAAAAGGCATATGA
8d71c1dff476 Uploaded
greg
parents:
diff changeset
32 GGTGGAAGTGAGGCTCACTGGACTGGGAGATGCTGCTCGAGATAGCAAAGCAATTATGGATAACCATGCATCATCAATGG
8d71c1dff476 Uploaded
greg
parents:
diff changeset
33 ACATCGTCACAACTGATGCTAAGAGGAAGTGGGAAGAATATTCCAAGCAGGCAGAGCAAGATTCAGAGGACGGTTCTAAC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
34 TTTTCAGCAGCAAAACATTGTCGCATGGAACTCATGCTCCAACAGTGTGTAAACTCTGTTGATGCTACTTCTCAACAGTG
8d71c1dff476 Uploaded
greg
parents:
diff changeset
35 GAAGAAGACACATGCATCTGTTAGTGAGATGAGCAGCAAACACGTTGCTGAAATTGAAGCACTTGTAAGGAGTGCCATTG
8d71c1dff476 Uploaded
greg
parents:
diff changeset
36 AGAGCAATGATCAGCATGATGCTGAGGTTGCTTCAGCAAGAATGGCAGCAGAAGAGGATGTAGCGAAAAATAGCAAAGAT
8d71c1dff476 Uploaded
greg
parents:
diff changeset
37 GTTCTTCAGCATTTTGATACTGTGATTGATCATGAGCGCAACTCAGCCGCTGGAGTGATGGCAGCAGTCGAAGCTCACTC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
38 AGCAACCCTGCATAAACTGCAAGAGGAACAATCAAGCCAGGCAACAGAGATTAATAGCCATGCGGAGGACACATTCCAAA
8d71c1dff476 Uploaded
greg
parents:
diff changeset
39 ACACCTACATGGACTATGAACCAACGGGAGAAACCCCAACAAGGTCGGAACCAGATATACCAAGCAGGGGAACAATCGAA
8d71c1dff476 Uploaded
greg
parents:
diff changeset
40 TCTCTTCGAGCCATGCCGATAGAAGCCCTCCTTGAAGAGTTCCGGGAGAACCATCCATACGAGTCCAAGGAGCCCAAACC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
41 GTCTCTCATACCACGCTCTCCACTCGTCCAGCTCAAC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
42 >contig_3
8d71c1dff476 Uploaded
greg
parents:
diff changeset
43 NNTGTGGATGAAGGAGTTGTTGTTGCTGGCTTGTCAGAGCAGGAGAAGGCATCTGTTTCTGAAATTCTGACAACTGCTAG
8d71c1dff476 Uploaded
greg
parents:
diff changeset
44 AGCTCATTCAGAAACAATTGAGAACCTTAAGAGAGATCATTCCCAGCAGGTATCCTGTATCGAACAGCACACGAATGATA
8d71c1dff476 Uploaded
greg
parents:
diff changeset
45 CTTTCAGGCAAAAATACATGGATTACGAGCCTACAGGGTCCACGCCAGTTAGGAGCGAGCCGGATATTCCCAGCAAAGGC
8d71c1dff476 Uploaded
greg
parents:
diff changeset
46 ACAATAGAGTCACTTCGTGCCATGCCTATAGATGCACTTGAAGAAGAATTTCGAGAAAACCATTCATACGAATCTGCTGT
8d71c1dff476 Uploaded
greg
parents:
diff changeset
47 TACAGGAAAGGAACTAATGCCGTCTGTTACGACTCGTGCACCATTTTCACAGATCAAC