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1 name: data_manager_dram_database_downloader
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2 owner: iuc
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3 description: DRAM for distilling microbial metabolism to automate the curation of microbiome function
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4 homepage_url: https://github.com/WrightonLabCSU/DRAM
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5 long_description: |
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6 DRAM (Distilled and Refined Annotation of Metabolism) is a tool for annotating metagenomic assembled genomes
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7 and VirSorter identified viral contigs. DRAM annotates MAGs and viral contigs using KEGG (if provided by the
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8 user), UniRef90, PFAM, dbCAN, RefSeq viral, VOGDB and the MEROPS peptidase database as well as custom user
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9 databases. DRAM is run in two stages. First an annotation step to assign database identifiers to gene and then a
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10 distill step to curate these annotations into useful functional categories. Additionally viral contigs are further
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11 analyzed during to identify potential AMGs. This is done via assigning an auxiliary score and flags representing the
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12 confidence that a gene is both metabolic and viral.
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13 remote_repository_url: https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_dram_database_downloader
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14 type: unrestricted
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15 categories:
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16 - Data Managers
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