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0
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1 <?xml version="1.0"?>
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2
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2 <tool_dependency>
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21
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3 <package name="R3" version="3.0.1">
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4 <repository name="package_R3" owner="fubar" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
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5 </package>
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6 <package name="package_BioCBasics" version="2.12">
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19
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7 <install version="1.0">
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8 <actions>
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11
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9 <action type="set_environment_for_install">
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10 <package name="R3" toolshed="http://testtoolshed.g2.bx.psu.edu" version="3.0.1">
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11 <repository name="package_R3" owner="fubar" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
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18
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12 </package>
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13
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11
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14 </action>
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15 <action type="shell_command">$R_HOME/R CMD BATCH installBioC.R </action>
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16 </actions>
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17 </install>
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19
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18 <readme>Installs some basic bioc packages for the edgeR tool
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19
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0
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20 </readme>
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21 </package>
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22 </tool_dependency>
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