Mercurial > repos > dfornika > mob_suite

changeset 47:f286c91a0b92 draft

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"planemo upload for repository https://github.com/phac-nml/mob-suite commit c67e48b0706acad2d8d15783a779af07a67380e3-dirty"
author dfornika
date Thu, 21 Nov 2019 23:36:10 +0000
parents 9513a59a7364
children 20dc7e1d2f4c
files mob_recon.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/mob_recon.xml	Thu Nov 21 20:15:56 2019 +0000
+++ b/mob_recon.xml	Thu Nov 21 23:36:10 2019 +0000
@@ -70,7 +70,7 @@
     <data name="mobtyper_aggregate_report" format="tabular" from_work_dir="outdir/mobtyper_aggregate_report.txt" label="${tool.name} on ${on_string}: Aggregate MOB-typer report for all contigs"/>
     <data name="chromosome" format="fasta" from_work_dir="outdir/chromosome.fasta" label="${tool.name} on ${on_string}: Chromosome"/>
     <collection name="plasmids" type="list" label="${tool.name} on ${on_string}: Plasmids">
-      <discover_datasets pattern="__name_and_ext__" directory="plasmids" />
+      <discover_datasets pattern="__name_and_ext__" directory="outdir/plasmids" />
     </collection>
   </outputs>
   <tests>