# HG changeset patch
# User dfornika
# Date 1574379370 0
# Node ID f286c91a0b92cdb0abea3b959433007aad406d5b
# Parent  9513a59a7364755b2ac30a2dd334e8a45a2442a8
"planemo upload for repository https://github.com/phac-nml/mob-suite commit c67e48b0706acad2d8d15783a779af07a67380e3-dirty"

diff -r 9513a59a7364 -r f286c91a0b92 mob_recon.xml
--- a/mob_recon.xml	Thu Nov 21 20:15:56 2019 +0000
+++ b/mob_recon.xml	Thu Nov 21 23:36:10 2019 +0000
@@ -70,7 +70,7 @@
     <data name="mobtyper_aggregate_report" format="tabular" from_work_dir="outdir/mobtyper_aggregate_report.txt" label="${tool.name} on ${on_string}: Aggregate MOB-typer report for all contigs"/>
     <data name="chromosome" format="fasta" from_work_dir="outdir/chromosome.fasta" label="${tool.name} on ${on_string}: Chromosome"/>
     <collection name="plasmids" type="list" label="${tool.name} on ${on_string}: Plasmids">
-      <discover_datasets pattern="__name_and_ext__" directory="plasmids" />
+      <discover_datasets pattern="__name_and_ext__" directory="outdir/plasmids" />
     </collection>
   </outputs>
   <tests>