Mercurial > repos > dfornika > data_manager_build_bracken_database

annotate data_manager_conf.xml @ 2:b9a0e4d0d310 draft

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planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
author dfornika
date Fri, 26 Jul 2019 17:06:49 -0400
parents 5a1116c3e2c8
children f25264bb7d6d
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a391d55f928a planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
parents:
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1 <data_managers>
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b9a0e4d0d310 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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2 <data_manager tool_file="data_manager/bracken_build_database.xml" id="bracken_build_database" version="2.2">
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5a1116c3e2c8 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
parents: 0
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3 <data_table name="bracken_databases">
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a391d55f928a planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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4 <output>
a391d55f928a planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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5 <column name="value"/>
a391d55f928a planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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6 <column name="name"/>
a391d55f928a planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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7 <column name="path" output_ref="out_file">
a391d55f928a planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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8 <move type="file">
a391d55f928a planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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9 <source>#import os#${os.path.dirname($path)}</source>
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5a1116c3e2c8 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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10 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">bracken_databases/#import os#${os.path.dirname($path)}</target>
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a391d55f928a planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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11 </move>
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5a1116c3e2c8 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
parents: 0
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12 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/bracken_databases/${path}</value_translation>
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a391d55f928a planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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13 <value_translation type="function">abspath</value_translation>
a391d55f928a planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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14 </column>
a391d55f928a planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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15 </output>
a391d55f928a planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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16 </data_table>
a391d55f928a planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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17 </data_manager>
a391d55f928a planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
dfornika
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18 </data_managers>